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DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly.

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第一作者: Ilari,Scheinin
第一单位: Department of Pathology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; Department of Pathology, Haartman Institute and HUSLAB, FIN-00014 University of Helsinki and Helsinki University Central Hospital, Helsinki, Finland;
作者单位: Department of Pathology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; Department of Pathology, Haartman Institute and HUSLAB, FIN-00014 University of Helsinki and Helsinki University Central Hospital, Helsinki, Finland; [1] Department of Pathology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; [2] Helen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, California 94158, USA; Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, California 94158, USA; [3] Department of Epidemiology and Biostatistics, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; Department of Mathematics, VU University, 1181 HV Amsterdam, The Netherlands; [4] Department of Pathology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; Department of Neurology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; [5] Department of Neurology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; Department of Neurology, Academic Medical Centre, 1105 AZ Amsterdam, The Netherlands; [6] Department of Pathology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; Department of Pathology, Radboud University Medical Centre, 6500 HB Nijmegen, The Netherlands; [7] Helen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, California 94158, USA; Department of Laboratory Medicine, University of California San Francisco, San Francisco, California 94153, USA; [8] Helen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, California 94158, USA; Department of Laboratory Medicine, University of California San Francisco, San Francisco, California 94153, USA; Bluestone Center for Clinical Research, New York University College of Dentistry, New York, New York 10010-4086, USA. [9] Department of Pathology, VU University Medical Center, 1007 MB Amsterdam, The Netherlands; B.Ylstra@vumc.nl. [10]
DOI 10.1101/gr.175141.114
PMID 25236618
发布时间 2022-11-09
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