换一批
换一批Role of ChIP-seq in the discovery of transcription factor binding sites, differential gene regulation mechanism, epigenetic marks and beyond.
第一作者：
Rasika,Mundade
第一单位：
a Department of Pharmacology and Toxicology ; Indiana University School of Medicine ; Indianapolis , IN USA.
作者：
关键词
ARBurrows-Wheeler aligner; C. elegansCaenorhabditis elegans; ChIPChIP sequencing; DNAChIP-seq processing pipeline; STATModel Organism ENCyclopedia Of DNA Elements; NF-κBUniversity of California Santa Cruz; UVandrogen receptor; BWAc-Jun NH2-terminal kinase; Kchromatinchromatin immunoprecipitation; CRschromatin regulators; ChIP-seqdeoxyribonuclease; EMSAdeoxyribonucleic acid; DNaseelectrophoresis mobility shift assay; ENCODEencyclopedia of DNA elements; FDRfalse discovery rate; GRglucocorticoid receptor; HDAChaematopoietic stem progenitor cells; HMhigh throughputhigh throughput ChIP; IL-βhistone deacetylase; HEKhistone modification; HTChIPhuman embryonic kidney; HSPCsimmunoprecipitationinterferon; JNKinterleukin β; IFNlysine; MACSmodel-based analysis of ChIP-seq; MEMEmultiple Em for motif elicitation; modENCODEnuclear factor κB; PCRpolymerase chain reaction; RNAribonucleic acid; R-ChIProbotic ChIP; SNPsequencingshort oligonucleotide alignment program; SPPsignal transducers and activators of transcription; SUMOsingle nucleotide polymorphism; SOAPsmall ubiquitin-like modifier; TFstranscription factor binding sites; TSStranscription factors; TFBStranscription start site; UCSCultraviolet.
主题词
结合部位(Binding Sites);染色质免疫沉淀法(Chromatin Immunoprecipitation);后成说, 遗传(Epigenesis, Genetic);基因表达谱(Gene Expression Profiling);组蛋白类(Histones);人类(Humans);序列分析, DNA(Sequence Analysis, DNA);转录因子(Transcription Factors)
DOI
10.4161/15384101.2014.949201
PMID
25486472
发布时间
2024-01-04
- 浏览39
Cell cycle (Georgetown, Tex.)
2847-52页
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