Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes.
作者:
Anna,Vlasova [1]
;
Salvador,Capella-Gutiérrez [2]
;
Martha,Rendón-Anaya [1]
;
Miguel,Hernández-Oñate [2]
;
André E,Minoche [3]
;
Ionas,Erb [4]
;
Francisco,Câmara [4]
;
Pablo,Prieto-Barja [5]
;
André,Corvelo [1]
;
Walter,Sanseverino [2]
;
Gastón,Westergaard [1]
;
Juliane C,Dohm [2]
;
Georgios J,Pappas [1]
;
Soledad,Saburido-Alvarez [2]
;
Darek,Kedra [6]
;
Irene,Gonzalez [7]
;
Luca,Cozzuto [8]
;
Jessica,Gómez-Garrido [9]
;
María A,Aguilar-Morón [10]
;
Nuria,Andreu [4]
;
O Mario,Aguilar [1]
;
Jordi,Garcia-Mas [2]
;
Maik,Zehnsdorf [2]
;
Martín P,Vázquez [11]
;
Alfonso,Delgado-Salinas [1]
;
Luis,Delaye [2]
;
Ernesto,Lowy [2]
;
Alejandro,Mentaberry [12]
;
Rosana P,Vianello-Brondani [2]
;
José Luís,García [11]
;
Tyler,Alioto [2]
;
Federico,Sánchez [11]
;
Heinz,Himmelbauer [13]
;
Marta,Santalla [7]
;
Cedric,Notredame [2]
;
Toni,Gabaldón [11]
;
Alfredo,Herrera-Estrella [8]
;
Roderic,Guigó [14]
作者单位:
Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003, Barcelona, Spain.
[1]
Universitat Pompeu Fabra (UPF), Dr. Aiguader 88, 08003, Barcelona, Spain.
[2]
Yeast and Basidiomycete Research Group, CBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 LT, Utrecht, The Netherlands.
[3]
Laboratorio Nacional de Genómica para la Biodiversidad, Cinvestav-Irapuato, CP 36821, Irapuato, Guanajuato, Mexico.
[4]
Garvan Institute of Medical Research, 384 Victoria Street, Sydney, NSW, 2010, Australia.
[5]
New York Genome Center, 101 Avenue of the Americas, New York, NY, 10013, USA.
[6]
IRTA, Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Campus UAB, 08193 Bellaterra, Barcelona, Catalonia, Spain.
[7]
Instituto de Agrobiotecnología Rosario (INDEAR), Rosario, Santa Fe, 2000, Argentina.
[8]
Department of Biotechnology, University of Natural Resources and Life Sciences (BOKU), Muthgasse 18, 1190, Vienna, Austria.
[9]
Department of Cellular Biology, University of Brasilia, Biological Science Institute, Brasília, DF, 70790-160, Brazil.
[10]
Genomics Unit, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003, Barcelona, Catalonia, Spain.
[11]
CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003, Barcelona, Spain.
[12]
Instituto de Biotecnología y Biología Molecular (IBBM), UNLP-CONICET, 1900, La Plata, Argentina.
[13]
Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, 04510, Mexico City, Mexico.
[14]
Departamento de Ingeniería Genética, Unidad Irapuato, Cinvestav, 36821, Irapuato, Guanajuato, Mexico.
[15]
European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom.
[16]
Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires (UBA), C1428EGA, Buenos Aires, Argentina.
[17]
EMBRAPA Rice and Beans, Biotechnology Laboratory, Santo Antônio de Goiás, GO, 75375-000, Brazil.
[18]
Environmental Biology Department, Centro de Investigaciones Biológicas, (CSIC), 28040, Madrid, Spain.
[19]
Depto. de Biología Molecular de Plantas, Instituto Biotecnología, Universidad Nacional Autónoma de México, 62210, Cuernavaca, Morelos, Mexico.
[20]
Mision Biológica de Galicia (MBG)-National Spanish Research Council (CSIC), 36080, Pontevedra, Spain.
[21]
Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003, Barcelona, Spain. toni.gabaldon@crg.eu.
[22]
Universitat Pompeu Fabra (UPF), Dr. Aiguader 88, 08003, Barcelona, Spain. toni.gabaldon@crg.eu.
[23]
Institució Catalana de Recerca i Estudis Avançats (ICREA), Pg. Lluís Companys 23, 08010, Barcelona, Spain. toni.gabaldon@crg.eu.
[24]
Laboratorio Nacional de Genómica para la Biodiversidad, Cinvestav-Irapuato, CP 36821, Irapuato, Guanajuato, Mexico. aherrera@langebio.cinvestav.mx.
[25]
Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003, Barcelona, Spain. roderic.guigo@crg.eu.
[26]
Universitat Pompeu Fabra (UPF), Dr. Aiguader 88, 08003, Barcelona, Spain. roderic.guigo@crg.eu.
[27]
IMIM (Hospital del Mar Medical Research Institute), 08003, Barcelona, Spain. roderic.guigo@crg.eu.
[28]
主题词
DNA, 植物(DNA, Plant);基因复制(Gene Duplication);基因表达谱(Gene Expression Profiling);基因组, 植物(Genome, Plant);基因型(Genotype);人类(Humans);微卫星重复(Microsatellite Repeats);菜豆属(Phaseolus);种系发生(Phylogeny);种子(Seeds);序列分析, DNA(Sequence Analysis, DNA)
DOI
10.1186/s13059-016-0883-6
PMID
26911872
发布时间
2024-03-24
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