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A workflow to process 3D+time microscopy images of developing organisms and reconstruct their cell lineage.

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第一作者： Emmanuel,Faure

第一单位： Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;Research Center in Applied Epistemology (CREA, UMR7656), CNRS and Ecole Polytechnique, 75005 Paris, France.;Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France.

作者： Emmanuel,Faure ^[1] ; Thierry,Savy ^[2] ; Barbara,Rizzi ^[3] ; Camilo,Melani ^[4] ; Olga,Stašová ^[5] ; Dimitri,Fabrèges ^[6] ; Róbert,Špir ^[5] ; Mark,Hammons ^[6] ; Róbert,Čúnderlík ^[5] ; Gaëlle,Recher ^[7] ; Benoît,Lombardot ^[1] ; Louise,Duloquin ^[7] ; Ingrid,Colin ^[8] ; Jozef,Kollár ^[5] ; Sophie,Desnoulez ^[8] ; Pierre,Affaticati ^[9] ; Benoît,Maury ^[8] ; Adeline,Boyreau ^[10] ; Jean-Yves,Nief ^[11] ; Pascal,Calvat ^[11] ; Philippe,Vernier ^[9] ; Monique,Frain ^[10] ; Georges,Lutfalla ^[12] ; Yannick,Kergosien ^[13] ; Pierre,Suret ^[14] ; Mariana,Remešíková ^[5] ; René,Doursat ^[2] ; Alessandro,Sarti ^[15] ; Karol,Mikula ^[5] ; Nadine,Peyriéras ^[6] ; Paul,Bourgine ^[2]

作者单位： Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;Research Center in Applied Epistemology (CREA, UMR7656), CNRS and Ecole Polytechnique, 75005 Paris, France.;Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France. ^[1] Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;Research Center in Applied Epistemology (CREA, UMR7656), CNRS and Ecole Polytechnique, 75005 Paris, France.;Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France.;BioEmergences Laboratory (USR3695), CNRS, Université Paris-Saclay, 91198 Gif-sur-Yvette, France. ^[2] Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France.;Department of Electronics, Information and Systems, University of Bologna, 40126, Italy. ^[3] Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;BioEmergences Laboratory (USR3695), CNRS, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.;Department of Electronics, Information and Systems, University of Bologna, 40126, Italy. ^[4] Department of Mathematics and Descriptive Geometry, Slovak University of Technology, 81005 Bratislava, Slovakia. ^[5] Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France.;BioEmergences Laboratory (USR3695), CNRS, Université Paris-Saclay, 91198 Gif-sur-Yvette, France. ^[6] Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France. ^[7] Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France. ^[8] Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France. ^[9] Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France.;BioEmergences Laboratory (USR3695), CNRS, Université Paris-Saclay, 91198 Gif-sur-Yvette, France. ^[10] Computing Center of the National Institute for Nuclear Physics and Particle Physics (CC-IN2P3, USR6402), CNRS, 69100 Villeurbanne, France. ^[11] Dynamics of Membrane Interactions in Normal and Pathological Cells (DIMNP, UMR5235), CNRS and Université Montpellier 2, 34090 Montpellier, France. ^[12] Complex Systems Institute Paris Ile-de-France (ISC-PIF, UPS3611), CNRS, 75013 Paris, France.;Multiscale Dynamics in Animal Morphogenesis (MDAM), Neurobiology &Development (N&D, UPR3294), CNRS, 91198 Gif-sur-Yvette, France.;BioEmergences Laboratory (USR3695), CNRS, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.;Medical Informatics and Knowledge Engineering in e-Health (LIMICS, UMR1142), CNRS and Université Paris 13, 93017 Bobigny, France. ^[13] Laser, Atomic and Molecular Physics Laboratory (UMR8523), CNRS and Université Lille 1-Science and Technology, 59650 Villeneuve-d'Ascq, France. ^[14] Department of Electronics, Information and Systems, University of Bologna, 40126, Italy. ^[15]