CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline.

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作者： Sonia,Agrawal ^[1] ; Cesar,Arze ^[1] ; Ricky S,Adkins ^[1] ; Jonathan,Crabtree ^[1] ; David,Riley ^[1] ; Mahesh,Vangala ^[1] ; Kevin,Galens ^[1] ; Claire M,Fraser ^[1] ; Hervé,Tettelin ^[2] ; Owen,White ^[1] ; Samuel V,Angiuoli ^[2] ; Anup,Mahurkar ^[1] ; W Florian,Fricke ^[3]

作者单位： Institute for Genome Sciences, Baltimore, MD, USA. ^[1] Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA. ^[2] Department of Epidemiology, University of Maryland School of Medicine, Baltimore, MD, USA. ^[3] Institute for Genome Sciences, Baltimore, MD, USA. w.florian.fricke@uni-hohenheim.de. ^[4] Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA. w.florian.fricke@uni-hohenheim.de. ^[5] Department of Nutrigenomics, University of Hohenheim, Stuttgart, Germany. w.florian.fricke@uni-hohenheim.de. ^[6]

关键词 Automated analysis Bioinformatics resource Cloud computing Comparative genomics Microbial genomics Virtual machine Whole-genome alignment

主题词自动化(Automation);基因组学(Genomics);序列比对(Sequence Alignment);序列分析(Sequence Analysis);软件(Software)

DOI 10.1186/s12864-017-3717-3

PMID 28449639

发布时间 2018-11-13

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