Scaffolding of long read assemblies using long range contact information.

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作者： Jay,Ghurye ^[1] ; Mihai,Pop ^[1] ; Sergey,Koren ^[2] ; Derek,Bickhart ^[3] ; Chen-Shan,Chin ^[4]

作者单位： Department of Computer Science, University of Maryland, 20742 College Park, Maryland, USA. ^[1] Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, 21702 Bethesda, Maryland, USA. ^[2] Cell Wall Biology and Utilization Research, US Dairy Forage Research Center, 53706 Madison, Wisconsin, USA. ^[3] Pacific Biosciences, 94205 Menlo Park, California, USA. jchin@pacificbiosciences.com. ^[4]

关键词 Assembly Hi-C Long reads Scaffolding

主题词算法(Algorithms);动物(Animals);物理图谱(Contig Mapping);基因组学(Genomics);山羊(Goats);人类(Humans)

DOI 10.1186/s12864-017-3879-z

PMID 28701198

发布时间 2024-06-03

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