Systematically linking tranSMART, Galaxy and EGA for reusing human translational research data.

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第一作者： Chao,Zhang

第一单位： Department of Computer Science, Vrije Universiteit Amsterdam, Amsterdam, 1081 HV, Netherlands.

作者： Chao,Zhang ^[1] ; Jochem,Bijlard ^[1] ; Christine,Staiger ^[2] ; Serena,Scollen ^[3] ; David,van Enckevort ^[4] ; Youri,Hoogstrate ^[5] ; Alexander,Senf ^[6] ; Saskia,Hiltemann ^[7] ; Susanna,Repo ^[6] ; Wibo,Pipping ^[4] ; Mariska,Bierkens ^[2] ; Stefan,Payralbe ^[8] ; Bas,Stringer ^[2] ; Jaap,Heringa ^[1] ; Andrew,Stubbs ^[1] ; Luiz Olavo,Bonino Da Silva Santos ^[6] ; Jeroen,Belien ^[9] ; Ward,Weistra ^[10] ; Rita,Azevedo ^[2] ; Kees,van Bochove ^[11] ; Gerrit,Meijer ^[2] ; Jan-Willem,Boiten ^[8] ; Jordi,Rambla ^[11] ; Remond,Fijneman ^[12] ; J Dylan,Spalding ^[8] ; Sanne,Abeln ^[7]

作者单位： Department of Computer Science, Vrije Universiteit Amsterdam, Amsterdam, 1081 HV, Netherlands. ^[1] The Hyve, Utrecht, 3511 MJ, Netherlands. ^[2] SURFsara, Amsterdam, 1098 XG, Netherlands. ^[3] ELIXIR Hub, Hinxton, CB10 1SD, UK. ^[4] Department of Genetics, University Medical Center Groningen, University of Groningen, Groningen, 9712 CP, Netherlands. ^[5] Department of Bioinformatics, Erasmus University Medical Center, Rotterdam, 3015 CE, Netherlands. ^[6] EMBL-EBI, Hinxton, CB10 1SD, UK. ^[7] Netherlands Cancer Institute, Amsterdam, 1066 CX, Netherlands. ^[8] Dutch Techcentre for Life Sciences, Utrecht, 3521 AL, Netherlands. ^[9] Department of Pathology, VU University Medical Center Amsterdam, Amsterdam, 1081 HV, Netherlands. ^[10] Lygature, Utrecht, 3521 AL, Netherlands. ^[11] Centre for Genomic Regulation (CRG), Barcelona, 08003, Spain. ^[12]

关键词 EGA FAIR Galaxy data management reproducibility tranSMART translational research workflows

DOI 10.12688/f1000research.12168.1

PMID 29123641

发布时间 2019-11-20

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Systematically linking tranSMART, Galaxy and EGA for reusing human translational research data.

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Systematically linking tranSMART, Galaxy and EGA for reusing human translational research data.

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