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The landscape of bacterial presence in tumor and adjacent normal tissue across 9 major cancer types using TCGA exome sequencing.

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第一作者： Rebecca M,Rodriguez

第一单位： Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii Mānoa, Honolulu, HI, United States.;Population Sciences in the Pacific Program-Cancer Epidemiology, University of Hawaii Cancer Center, Honolulu, HI, United States.

作者： Rebecca M,Rodriguez ^[1] ; Brenda Y,Hernandez ^[2] ; Mark,Menor ^[3] ; Youping,Deng ^[3] ; Vedbar S,Khadka ^[3]

作者单位： Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii Mānoa, Honolulu, HI, United States.;Population Sciences in the Pacific Program-Cancer Epidemiology, University of Hawaii Cancer Center, Honolulu, HI, United States. ^[1] Epidemiology, University of Hawaii Cancer Center, University of Hawaii, Honolulu, HI, United States.;Population Sciences in the Pacific Program-Cancer Epidemiology, University of Hawaii Cancer Center, Honolulu, HI, United States. ^[2] Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii Mānoa, Honolulu, HI, United States. ^[3]

关键词 BLCA, bladder carcinoma CESC, cervical & endocervical squamous cell carcinomas COAD, colon adenocarcinoma COREAD, colon and rectal adenocarcinoma TCGA cohorts Cancer microbiome Exome sequencing HNSC, head & neck squamous cell carcinoma L2FC, log 2 fold change LIHC, liver hepatocellular carcinoma LUAD, lung adenocarcinoma LUSC, lung squamous cell carcinoma Microbial landscape READ, rectal adenocarcinoma STAD, stomach adenocarcinoma TCGA TCGA, The Cancer Genome Atlas

DOI 10.1016/j.csbj.2020.03.003

PMID 32257046

发布时间 2024-04-25

基金项目

R01 CA230514/CA/NCI NIH HHS/United States P20 GM103466/GM/NIGMS NIH HHS/United States U54 MD007601/MD/NIMHD NIH HHS/United States P30 GM114737/GM/NIGMS NIH HHS/United States U54 MD007584/MD/NIMHD NIH HHS/United States R01 CA223490/CA/NCI NIH HHS/United States

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