换一批PreMSIm: An R package for predicting microsatellite instability from the expression profiling of a gene panel in cancer.
第一作者：
Lin,Li
第一单位：
Biomedical Informatics Research Lab, School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, Nanjing 211198, China.;Cancer Genomics Research Center, School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, Nanjing 211198, China.;Big Data Research Institute, China Pharmaceutical University, Nanjing 211198, China.
作者：
关键词
ACC, adrenocortical carcinomaAUC, area under the curveAlgorithmBLCA, bladder urothelial carcinomaBRCA, breast invasive carcinomaCESC, cervical squamous cell carcinoma and endocervical adenocarcinomaCHOL, cholangiocarcinomaCOAD, colon adenocarcinomaCV, cross validationCancerClassificationDLBC, lymphoid neoplasm diffuse large B-cell lymphomaESCA, esophageal carcinomaGBM, glioblastoma multiformeGEO, Gene Expression OmnibusGO, gene ontologyGene expression profilingHNSC, head and neck squamous cell carcinomaKICH, kidney chromophobeKIRC, kidney renal clear cell carcinomaKIRP, kidney renal papillary cell carcinomaLAML, acute myeloid leukemiaLGG, brain lower grade gliomaLIHC, liver hepatocellular carcinomaLUAD, lung adenocarcinomaLUSC, lung squamous cell carcinomaMESO, mesotheliomaMSI, microsatellite instabilityMSS, microsatellite stabilityMachine learningMicrosatellite instabilityOV, ovarian serous cystadenocarcinomaPAAD, pancreatic adenocarcinomaPCPG, pheochromocytoma and paragangliomaPPI, protein-protein interactionPRAD, prostate adenocarcinomaREAD, rectum adenocarcinomaRF, random forestROC, receiver operating characteristicSARC, sarcomaSKCM, skin cutaneous melanomaSTAD, stomach adenocarcinomaSVM, support vector machineTCGA, The Cancer Genome AtlasTGCT, testicular germ cell tumorsTHCA, thyroid carcinomaTHYM, thymomaUCEC, uterine corpus endometrial carcinomaUCS, uterine carcinosarcomaUVM, uveal melanomaXGBoost, extreme gradient boostingk-NN, k-nearest neighbor
DOI
10.1016/j.csbj.2020.03.007
PMID
32257050
发布时间
2020-09-28
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