Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival.
第一作者:
Syed H,Zaidi
第一单位:
Ontario Institute for Cancer Research, 661 University Avenue, Toronto, ON, M5G 0A3, Canada.
作者:
Syed H,Zaidi [1]
;
Tabitha A,Harrison [2]
;
Amanda I,Phipps [2]
;
Robert,Steinfelder [2]
;
Quang M,Trinh [1]
;
Conghui,Qu [2]
;
Barbara L,Banbury [2]
;
Peter,Georgeson [3]
;
Catherine S,Grasso [4]
;
Marios,Giannakis [5]
;
Jeremy B,Adams [1]
;
Elizabeth,Alwers [6]
;
Efrat L,Amitay [6]
;
Richard T,Barfield [7]
;
Sonja I,Berndt [8]
;
Ivan,Borozan [1]
;
Hermann,Brenner [9]
;
Stefanie,Brezina [10]
;
Daniel D,Buchanan [11]
;
Yin,Cao [12]
;
Andrew T,Chan [13]
;
Jenny,Chang-Claude [14]
;
Charles M,Connolly [2]
;
David A,Drew [15]
;
Alton Brad,Farris [16]
;
Jane C,Figueiredo [17]
;
Amy J,French [18]
;
Charles S,Fuchs [19]
;
Levi A,Garraway [5]
;
Steve,Gruber [20]
;
Mark A,Guinter [21]
;
Stanley R,Hamilton [22]
;
Sophia,Harlid [23]
;
Lawrence E,Heisler [1]
;
Akihisa,Hidaka [2]
;
John L,Hopper [24]
;
Wen-Yi,Huang [8]
;
Jeroen R,Huyghe [2]
;
Mark A,Jenkins [25]
;
Paul M,Krzyzanowski [1]
;
Mathieu,Lemire [1]
;
Yi,Lin [2]
;
Xuemei,Luo [1]
;
Elaine R,Mardis [26]
;
John D,McPherson [27]
;
Jessica K,Miller [1]
;
Victor,Moreno [28]
;
Xinmeng Jasmine,Mu [5]
;
Reiko,Nishihara [29]
;
Nickolas,Papadopoulos [30]
;
Danielle,Pasternack [1]
;
Michael J,Quist [2]
;
Adilya,Rafikova [1]
;
Emma E G,Reid [1]
;
Eve,Shinbrot [31]
;
Brian H,Shirts [32]
;
Lincoln D,Stein [1]
;
Cherie D,Teney [1]
;
Lee,Timms [1]
;
Caroline Y,Um [21]
;
Bethany,Van Guelpen [33]
;
Megan,Van Tassel [1]
;
Xiaolong,Wang [2]
;
David A,Wheeler [31]
;
Christina K,Yung [1]
;
Li,Hsu [34]
;
Shuji,Ogino [35]
;
Andrea,Gsur [10]
;
Polly A,Newcomb [7]
;
Steven,Gallinger [36]
;
Michael,Hoffmeister [6]
;
Peter T,Campbell [21]
;
Stephen N,Thibodeau [18]
;
Wei,Sun [2]
;
Thomas J,Hudson [1]
;
Ulrike,Peters [37]
作者单位:
Ontario Institute for Cancer Research, 661 University Avenue, Toronto, ON, M5G 0A3, Canada.
[1]
Public Health Sciences Division, Fred Hutchinson Cancer Research Centre, 1100 Fairview Ave N, Seattle, WA, 98109, USA.
[2]
Colorectal Oncogenomics Group, Department of Clinical Pathology, The University of Melbourne, Parkville, Victoria, Australia.;University of Melbourne Centre for Cancer Research, Victorian Comprehensive Cancer Centre, Parkville, VIC, 3010, Australia.
[3]
Public Health Sciences Division, Fred Hutchinson Cancer Research Centre, 1100 Fairview Ave N, Seattle, WA, 98109, USA.;Department of Surgery, Cedar Sinai Medical Center, 8700 Beverly Blvd, Los Angeles, CA, 90048, USA.
[4]
Department of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, 450 Brookline Avenue, Boston, MA, 02215, USA.;Broad Institute of MIT and Harvard, 415 Main St, Cambridge, MA, 02142, USA.
[5]
Division of Clinical Epidemiology and Aging Research, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.
[6]
Public Health Sciences Division, Fred Hutchinson Cancer Research Centre, 1100 Fairview Ave N, Seattle, WA, 98109, USA.;Department of Epidemiology, University of Washington, Seattle, WA, USA.
[7]
Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, MD, 20892, USA.
[8]
Division of Clinical Epidemiology and Aging Research, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.;Division of Preventive Oncology, German Cancer Research Center (DKFZ) and National Center for Tumor Diseases (NCT), Heidelberg, Germany.;German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany.
[9]
Institute of Cancer Research, Department of Medicine I, Medical University of Vienna, Borschekagasse 8a, 1090, Vienna, Austria.
[10]
Colorectal Oncogenomics Group, Department of Clinical Pathology, The University of Melbourne, Parkville, Victoria, Australia.;University of Melbourne Centre for Cancer Research, Victorian Comprehensive Cancer Centre, Parkville, VIC, 3010, Australia.;Genomic Medicine and Family Cancer Clinic, The Royal Melbourne Hospital, Parkville, VIC, Australia.;Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia.
[11]
Clinical and Translational Epidemiology Unit, Massachusetts General Hospital and Harvard Medical School, 100 Cambridge Street, Boston, MA, 02114, USA.;Division of Gastroenterology, Massachusetts General Hospital and Harvard Medical School, 25 Shattuck Street, Boston, MA, 02115, USA.;Division of Public Health Sciences, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
[12]
Broad Institute of MIT and Harvard, 415 Main St, Cambridge, MA, 02142, USA.;Clinical and Translational Epidemiology Unit, Massachusetts General Hospital and Harvard Medical School, 100 Cambridge Street, Boston, MA, 02114, USA.;Division of Gastroenterology, Massachusetts General Hospital and Harvard Medical School, 25 Shattuck Street, Boston, MA, 02115, USA.;Channing Division of Network Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.;Department of Epidemiology, Harvard T.H. Chan School of Public Health, Harvard University, 677 Huntington Avenue, Boston, MA, 02115, USA.;Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Harvard University, 677 Huntington Avenue, Boston, MA, 02115, USA.
[13]
Division of Cancer Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.;Cancer Epidemiology Group, University Medical Centre Hamburg-Eppendorf, University Cancer Centre Hamburg (UCCH), 20246, Hamburg, Germany.
[14]
Clinical and Translational Epidemiology Unit, Massachusetts General Hospital and Harvard Medical School, 100 Cambridge Street, Boston, MA, 02114, USA.;Division of Gastroenterology, Massachusetts General Hospital and Harvard Medical School, 25 Shattuck Street, Boston, MA, 02115, USA.
[15]
Pathology and Laboratory Medicine, Emory University School of Medicine, 1364 Clifton Rd. NE, Atlanta, GA, 30322, USA.
[16]
Department of Medicine, Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, 8700 Beverly Blvd, Los Angeles, CA, 90048, USA.;Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
[17]
Division of Laboratory Genetics, Department of Laboratory Medicine and Pathology, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA.
[18]
Yale Cancer Center, 333 Cedar St, New Haven, CT, 06510, USA.;Department of Medicine, Yale School of Medicine, New Haven, CT, USA.;Smilow Cancer Hospital, New Haven, CT, USA.
[19]
Department of Preventive Medicine, USC Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, 1441 Eastlake Avenue, Los Angeles, CA, 90089, USA.
[20]
Behavioral and Epidemiology Research Group, American Cancer Society, 250 Williams St NW, Atlanta, GA, 30303, USA.
[21]
City of Hope Comprehensive Cancer Center, 1500 East Duarte Road, Duarte, CA, 91010, USA.
[22]
Department of Radiation Sciences, Oncology Unit, Umeå University, SE-901 87, Umeå, Sweden.
[23]
University of Melbourne Centre for Cancer Research, Victorian Comprehensive Cancer Centre, Parkville, VIC, 3010, Australia.
[24]
Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, VIC, 3010, Australia.
[25]
Institute for Genomic Medicine, Nationwide Children's Hospital and The Ohio State University College of Medicine, 575 Children's Crossroad, Columbus, OH, 43215, USA.
[26]
Ontario Institute for Cancer Research, 661 University Avenue, Toronto, ON, M5G 0A3, Canada.;Department of Biochemistry and Molecular Medicine, UC Davis School of Medicine, 2700 Stockton Blvd, Sacramento, CA, 95817, USA.
[27]
Oncology Data Analytics Program, Catalan Institute of Oncology and ONCOBELL Program, IDIBELL, Avinguda de la Granvia de l'Hospitalet 199-203, 08908, L'Hospitalet de Llobregat, Barcelona, Spain.;CIBER Epidemiología y Salud Pública (CIBERESP), 28029, Madrid, Spain.;Department of Clinical Sciences, Faculty of Medicine, University of Barcelona, 08907, Barcelona, Spain.
[28]
Department of Oncologic Pathology, Dana-Farber Cancer Institute and Harvard Medical School, 450 Brookline Avenue, Boston, MA, 02215, USA.;Department of Nutrition, Harvard T.H. Chan School of Public Health, Boston, MA, USA.;Program in MPE Molecular Pathological Epidemiology, Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, 75 Francis Street, Boston, MA, 02115, USA.
[29]
Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, The Johns Hopkins Institution, 1650 Orleans Street, Baltimore, MD, 21231, USA.
[30]
Human Genome Sequencing Centre, Baylor College of Medicine, One Baylor Plaza, Alkek N1419, Houston, TX, 77030, USA.
[31]
Department of Laboratory Medicine, University of Washington, University of Washington Medical Center, 1959 NE Pacific St, Seattle, WA, 98195, USA.
[32]
Department of Radiation Sciences, Oncology Unit, Umeå University, SE-901 87, Umeå, Sweden.;Wallenberg Centre for Molecular Medicine, Umeå University, SE-901 87, Umeå, Sweden.
[33]
Public Health Sciences Division, Fred Hutchinson Cancer Research Centre, 1100 Fairview Ave N, Seattle, WA, 98109, USA.;Department of Biostatistics, University of Washington, Seattle, WA, USA.
[34]
Broad Institute of MIT and Harvard, 415 Main St, Cambridge, MA, 02142, USA.;Department of Epidemiology, Harvard T.H. Chan School of Public Health, Harvard University, 677 Huntington Avenue, Boston, MA, 02115, USA.;Department of Oncologic Pathology, Dana-Farber Cancer Institute and Harvard Medical School, 450 Brookline Avenue, Boston, MA, 02215, USA.;Program in MPE Molecular Pathological Epidemiology, Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, 75 Francis Street, Boston, MA, 02115, USA.
[35]
Ontario Institute for Cancer Research, 661 University Avenue, Toronto, ON, M5G 0A3, Canada.;Lunenfeld Tanenbaum Research Institute, Mount Sinai Hospital, University of Toronto, Toronto, ON, Canada.;Department of Surgery, University Health Network Toronto General Hospital, Toronto, ON, Canada.
[36]
Public Health Sciences Division, Fred Hutchinson Cancer Research Centre, 1100 Fairview Ave N, Seattle, WA, 98109, USA. upeters@fredhutch.org.;Department of Epidemiology, University of Washington, Seattle, WA, USA. upeters@fredhutch.org.
[37]
医学主题词
结肠肿瘤(Colonic Neoplasms);结直肠肿瘤(Colorectal Neoplasms);高通量核苷酸序列分析(High-Throughput Nucleotide Sequencing);人类(Humans);INDEL突变(INDEL Mutation);突变(Mutation);肿瘤蛋白质类(Neoplasm Proteins);预后(Prognosis);肿瘤抑制蛋白质p53(Tumor Suppressor Protein p53)
DOI
10.1038/s41467-020-17386-z
PMID
32686686
发布时间
2026-03-30
基金项目
R01 CA076366/CA/NCI NIH HHS/United States
P30 CA015704/CA/NCI NIH HHS/United States
U24 CA074783/CA/NCI NIH HHS/United States
U01 CA137088/CA/NCI NIH HHS/United States
U24 CA074794/CA/NCI NIH HHS/United States
U01 CA206110/CA/NCI NIH HHS/United States
R01 CA176272/CA/NCI NIH HHS/United States
U01 CA167551/CA/NCI NIH HHS/United States
UM1 CA186107/CA/NCI NIH HHS/United States
U01 CA074783/CA/NCI NIH HHS/United States
U01 CA164930/CA/NCI NIH HHS/United States
U01 CA074794/CA/NCI NIH HHS/United States
R01 CA223498/CA/NCI NIH HHS/United States
CIHR/Canada
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