AncPhore: A versatile tool for anchor pharmacophore steered drug discovery with applications in discovery of new inhibitors targeting metallo-<i>β</i>-lactamases and indoleamine/tryptophan 2,3-dioxygenases.
第一作者:
Qingqing,Dai
第一单位:
Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Department of Medicinal Chemistry, West China School of Pharmacy, Sichuan University, Chengdu 610041, China.
作者:
关键词
AMPC, asian mouse phenotyping consortiumAP, anchor pharmacophoreAR, aromatic ringAUC, area under the curveAnchor pharmacophoreBACE1, beta-secretase 1BRD4, bromodomain-containing protein 4CA, carbonic anhydraseCA2, carbonic anhydrase 2CDK2, cyclin-dependent kinase 2CTS, cathepsinsCV, covalent bondingCatK, cathepsin KEF, enrichment factorEX, exclusion volumeGA, genetic algorithmHA, hydrogen-bond acceptorHD, hydrogen-bond donorHIV-P, human immunodeficiency virus proteaseHIV1-P, human immunodeficiency virus type 1 proteaseHY, hydrophobicIDO1, indoleamine 2,3-dioxygenase 1IMP, imipenemaseIndoleamine 2,3-dioxygenaseLE, ligand efficiencyMAPK14, mitogen-activated protein kinase 14MB, metal coordinationMBL, metallo-β-lactamaseMIC, minimum inhibitory concentrationMMP, matrix metalloproteinaseMMP13, matrix metallopeptidase 13Metallo-β-lactamaseMetalloenzymeNDM, new delhi MBLNE, negatively charged centerNP, without anchor pharmacophore featuresPO, positively charged centerRMSD, root mean square deviationROC curve, receiver operating characteristic curveROCK1, rho-associated protein kinase 1RT, reverse transcriptaseRTK, receptor tyrosine kinaseSBL, serine beta lactamaseSSEL, secondary structure element lengthSTK, serine threonine kinaseTDO, tryptophan 2,3-dioxygenaseTDSS, torsion-driving systematic searchTNKS2, tankyrase 2Tryptophan 2,3-dioxygenaseVEGFR2, vascular endothelial growth factor receptor 2VIM, verona integron-encoded MBLVirtual screening
DOI
10.1016/j.apsb.2021.01.018
PMID
34386329
发布时间
2021-08-14
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Acta pharmaceutica Sinica. B
2021年11卷7期
1931-1946页
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