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Dynamically expressed small RNAs, substantially driven by genomic structural variants, contribute to transcriptomic changes during tomato domestication.

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第一作者： You,Qing

第一单位： Beijing Key Laboratory for Agricultural Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China.;Bioinformatics Center, Beijing University of Agriculture, Beijing, 102206, China.

作者： You,Qing ^[1] ; Yi,Zheng ^[2] ; Sizolwenkosi,Mlotshwa ^[3] ; Heather N,Smith ^[4] ; Xin,Wang ^[5] ; Xuyang,Zhai ^[1] ; Esther,van der Knaap ^[6] ; Ying,Wang ^[7] ; Zhangjun,Fei ^[8]

作者单位： Beijing Key Laboratory for Agricultural Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China.;Bioinformatics Center, Beijing University of Agriculture, Beijing, 102206, China. ^[1] Beijing Key Laboratory for Agricultural Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China.;Bioinformatics Center, Beijing University of Agriculture, Beijing, 102206, China.;Boyce Thompson Institute, Cornell University, Ithaca, NY, 14853, USA. ^[2] Department of Molecular Genetics, Ohio State University, Columbus, OH, 43210, USA. ^[3] Department of Biological Sciences, Mississippi State University, Starkville, MS, 39759, USA. ^[4] Boyce Thompson Institute, Cornell University, Ithaca, NY, 14853, USA. ^[5] Center for Applied Genetic Technologies, University of Georgia, Athens, GA, 30602, USA.;Institute for Plant Breeding, Genetics and Genomics, University of Georgia, Athens, GA, 30602, USA.;Department of Horticulture, University of Georgia, Athens, GA, 30602, USA. ^[6] Department of Molecular Genetics, Ohio State University, Columbus, OH, 43210, USA.;Department of Biological Sciences, Mississippi State University, Starkville, MS, 39759, USA. ^[7] Boyce Thompson Institute, Cornell University, Ithaca, NY, 14853, USA.;USDA-ARS, Robert W. Holley Center for Agriculture and Health, Ithaca, NY, 14853, USA. ^[8]

关键词 Solanum lycopersicum Solanum pimpinellifolium 24-nucleotide hc-siRNA domestication genomic structural variant miRNA phasiRNA tomato

主题词基因表达调控, 植物(Gene Expression Regulation, Plant);染色体结构变异(Genomic Structural Variation);微RNAs(MicroRNAs);核苷酸类(Nucleotides);RNA, 植物(RNA, Plant);RNA, 小分子干扰(RNA, Small Interfering)

DOI 10.1111/tpj.15798

PMID 35514123

发布时间 2022-12-07

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