Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation.

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第一作者： Guanjue,Xiang

第一单位： The Bioinformatics and Genomics Program, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, USA. guanjuexiang@gmail.com.

作者： Guanjue,Xiang ^[1] ; Belinda,Giardine ^[2] ; Lin,An ^[3] ; Chen,Sun ^[4] ; Cheryl A,Keller ^[2] ; Elisabeth F,Heuston ^[5] ; Stacie M,Anderson ^[6] ; Martha,Kirby ^[6] ; David,Bodine ^[5] ; Yu,Zhang ^[7] ; Ross C,Hardison ^[8]

作者单位： The Bioinformatics and Genomics Program, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, USA. guanjuexiang@gmail.com. ^[1] Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA. ^[2] The Bioinformatics and Genomics Program, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, USA. ^[3] Department of Computer Science and Engineering, The Pennsylvania State University, University Park, PA, USA. ^[4] NHGRI Hematopoiesis Section, GMBB, Bethesda, MD, USA. ^[5] NHGRI Flow Cytometry Core, Bethesda, MD, USA. ^[6] Department of Statistics, The Pennsylvania State University, University Park, PA, USA. ^[7] Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA. rch8@psu.edu. ^[8]

关键词 Cell differentiation Epigenetic state visualization cCRE Clustering and Visualization cCRE indexing

主题词表观基因组学(Epigenomics);细胞分化(Cell Differentiation);染色质(Chromatin);后成说, 遗传(Epigenesis, Genetic);聚类分析(Cluster Analysis)

DOI 10.1186/s12859-023-05223-1

PMID 36941541

发布时间 2024-09-15

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