HISS: Snakemake-based workflows for performing SMRT-RenSeq assembly, AgRenSeq and dRenSeq for the discovery of novel plant disease resistance genes.

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作者： Thomas M,Adams ^[1] ; Moray,Smith ^[2] ; Yuhan,Wang ^[3] ; Lynn H,Brown ^[3] ; Micha M,Bayer ^[4] ; Ingo,Hein ^[5]

作者单位： Department of Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, DD2 5DA, UK. thomas.adams@hutton.ac.uk. ^[1] Department of Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, DD2 5DA, UK.;School of Biology, University of St Andrews, St Andrews, KY16 9ST, UK. ^[2] Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK. ^[3] Department of Information and Computational Sciences, The James Hutton Institute, Invergowrie, DD2 5DA, UK. ^[4] Department of Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, DD2 5DA, UK. ingo.hein@hutton.ac.uk.;Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK. ingo.hein@hutton.ac.uk. ^[5]

关键词 HiFi sequencing High-throughput NLRs Plant disease resistance SMRT-AgRenSeq-d Snakemake Workflow dRenSeq

主题词工作流(Workflow);结果可重复性(Reproducibility of Results);基因, 植物(Genes, Plant);软件(Software)

DOI 10.1186/s12859-023-05335-8

PMID 37198529

发布时间 2025-02-10

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