Critical assessment of variant prioritization methods for rare disease diagnosis within the Rare Genomes Project.
第一作者:
Sarah L,Stenton
第一单位:
Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.;Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.;Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA.
作者:
Sarah L,Stenton [1]
;
Melanie,O'Leary [2]
;
Gabrielle,Lemire [3]
;
Grace E,VanNoy [2]
;
Stephanie,DiTroia [3]
;
Vijay S,Ganesh [4]
;
Emily,Groopman [3]
;
Emily,O'Heir [3]
;
Brian,Mangilog [2]
;
Ikeoluwa,Osei-Owusu [2]
;
Lynn S,Pais [3]
;
Jillian,Serrano [3]
;
Moriel,Singer-Berk [2]
;
Ben,Weisburd [2]
;
Michael,Wilson [2]
;
Christina,Austin-Tse [5]
;
Marwa,Abdelhakim [6]
;
Azza,Althagafi [7]
;
Giulia,Babbi [8]
;
Riccardo,Bellazzi [9]
;
Samuele,Bovo [10]
;
Maria Giulia,Carta [11]
;
Rita,Casadio [8]
;
Pieter-Jan,Coenen [12]
;
Federica,De Paoli [13]
;
Matteo,Floris [14]
;
Manavalan,Gajapathy [15]
;
Robert,Hoehndorf [16]
;
Julius O B,Jacobsen [17]
;
Thomas,Joseph [18]
;
Akash,Kamandula [19]
;
Panagiotis,Katsonis [20]
;
Cyrielle,Kint [12]
;
Olivier,Lichtarge [21]
;
Ivan,Limongelli [13]
;
Yulan,Lu [22]
;
Paolo,Magni [9]
;
Tarun Karthik Kumar,Mamidi [15]
;
Pier Luigi,Martelli [8]
;
Marta,Mulargia [14]
;
Giovanna,Nicora [13]
;
Keith,Nykamp [12]
;
Vikas,Pejaver [23]
;
Yisu,Peng [19]
;
Thi Hong Cam,Pham [24]
;
Maurizio S,Podda [14]
;
Aditya,Rao [18]
;
Ettore,Rizzo [13]
;
Vangala G,Saipradeep [18]
;
Castrense,Savojardo [8]
;
Peter,Schols [12]
;
Yang,Shen [25]
;
Naveen,Sivadasan [18]
;
Damian,Smedley [17]
;
Dorian,Soru [26]
;
Rajgopal,Srinivasan [18]
;
Yuanfei,Sun [27]
;
Uma,Sunderam [18]
;
Wuwei,Tan [27]
;
Naina,Tiwari [18]
;
Xiao,Wang [22]
;
Yaqiong,Wang [22]
;
Amanda,Williams [20]
;
Elizabeth A,Worthey [15]
;
Rujie,Yin [27]
;
Yuning,You [27]
;
Daniel,Zeiberg [19]
;
Susanna,Zucca [13]
;
Constantina,Bakolitsa [28]
;
Steven E,Brenner [28]
;
Stephanie M,Fullerton [29]
;
Predrag,Radivojac [19]
;
Heidi L,Rehm [5]
;
Anne,O'Donnell-Luria [1]
作者单位:
Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.;Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.;Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA.
[1]
Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
[2]
Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.;Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
[3]
Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.;Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.;Department of Neurology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
[4]
Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.;Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA.
[5]
Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
[6]
Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.;Computer, Electrical and Mathematical Sciences & Engineering Division (CEMSE), Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.;Computer Science Department, College of Computers and Information Technology, Taif University, Taif, Saudi Arabia.
[7]
Biocomputing Group, Department of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.
[8]
enGenome Srl, Pavia, Italy.;Department of Electrical, Computer and Biomedical Engineering, University of Pavia, Pavia, Italy.
[9]
Department of Agricultural and Food Sciences, University of Bologna, Bologna, Italy.
[10]
Department of Electrical, Computer and Biomedical Engineering, University of Pavia, Pavia, Italy.
[11]
Invitae, San Francisco, California, USA.
[12]
enGenome Srl, Pavia, Italy.
[13]
Department of Biomedical Sciences, University of Sassari, Sassari, Italy.
[14]
Center for Computational Genomics and Data Science, The University of Alabama at Birmingham, Birmingham, AL, USA.;Department of Genetics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, AL, USA.;Hugh Kaul Precision Medicine Institute, The University of Alabama at Birmingham, Birmingham, AL, USA.
[15]
Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.;Computer, Electrical and Mathematical Sciences & Engineering Division (CEMSE), Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
[16]
William Harvey Research Institute, Barts & The London School of Medicine and Dentistry, Queen Mary University of London, Charterhouse Square, London, UK.
[17]
TCS Research, Tata Consultancy Services (TCS) Ltd, Deccan Park, Madhapur, Hyderabad, India.
[18]
Khoury College of Computer Sciences, Northeastern University, Boston, MA, USA.
[19]
Department of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA.
[20]
Department of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA.;Structural and Computational Biology & Molecular Biophysics Program, Baylor College of Medicine, Houston, TX, USA.;Computational and Integrative Biomedical Research Center, Baylor College of Medicine, Houston, TX, USA.
[21]
Center for molecular medicine, Pediatric Research Institute, Children's Hospital of Fudan University, Shanghai, China.
[22]
Institute for Genomic Health, Icahn School of Medicine at Mount Sinai, New York, NY, USA.;Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
[23]
Anatomy and Surgical Training Department, University of Medicine and Pharmacy, Hue University, Vietnam.
[24]
Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA.;Department of Computer Science and Engineering, Texas A&M University, College Station, TX, USA.;Institute of Biosciences and Technology and Department of Translational Medical Sciences, College of Medicine, Texas A&M University, Houston, Texas, USA.
[25]
Independent consultant.
[26]
Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA.
[27]
Department of Plant and Microbial Biology and Center for Computational Biology, University of California, Berkeley, CA, USA.
[28]
Department of Bioethics & Humanities, University of Washington School of Medicine, Seattle, WA, USA.
[29]
DOI
10.1101/2023.08.02.23293212
PMID
37577678
发布时间
2024-11-07
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medRxiv
medRxiv
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