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Haplotype-resolved genome assembly of Populus tremula × P. alba reveals aspen-specific megabase satellite DNA.

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第一作者： Ran,Zhou

第一单位： School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, USA.;Department of Genetics, University of Georgia, Athens, Georgia, USA.;Department of Plant Biology, University of Georgia, Athens, Georgia, USA.

作者： Ran,Zhou ^[1] ; Jerry W,Jenkins ^[2] ; Yibing,Zeng ^[3] ; Shengqiang,Shu ^[4] ; Hosung,Jang ^[3] ; Scott A,Harding ^[1] ; Melissa,Williams ^[2] ; Christopher,Plott ^[2] ; Kerrie W,Barry ^[4] ; Maxim,Koriabine ^[4] ; Mojgan,Amirebrahimi ^[4] ; Jayson,Talag ^[5] ; Shanmugam,Rajasekar ^[5] ; Jane,Grimwood ^[2] ; Robert J,Schmitz ^[3] ; R Kelly,Dawe ^[6] ; Jeremy,Schmutz ^[7] ; Chung-Jui,Tsai ^[1]

作者单位： School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, USA.;Department of Genetics, University of Georgia, Athens, Georgia, USA.;Department of Plant Biology, University of Georgia, Athens, Georgia, USA. ^[1] HudsonAlpha Institute of Biotechnology, Huntsville, Alabama, USA. ^[2] Department of Genetics, University of Georgia, Athens, Georgia, USA. ^[3] DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, 94720, USA. ^[4] Arizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, Arizona, USA. ^[5] Department of Genetics, University of Georgia, Athens, Georgia, USA.;Department of Plant Biology, University of Georgia, Athens, Georgia, USA. ^[6] HudsonAlpha Institute of Biotechnology, Huntsville, Alabama, USA.;DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, 94720, USA. ^[7]

关键词 Populus T2T assembly centromere chromosome knob genome assembly satellite DNA tandem repeat arrays

医学主题词 DNA, 卫星(DNA, Satellite);单倍型(Haplotypes);杨属(Populus);生态系统(Ecosystem);反转录因子(Retroelements);着丝粒(Centromere)

DOI 10.1111/tpj.16454

PMID 37675609

发布时间 2025-12-22

基金项目

DE-AC02-05CH11231/Department of Energy (DOE) Biological and Environmental Research The Center for Bioenergy Innovation/Department of Energy (DOE) Biological and Environmental Research IOS-1546867/National Science Foundation (NSF) Division of Integrative Organismal Systems Hank Haynes Forest Biotechnology Endowment/Georgia Research Alliance CSP1397/DOE Joint Genome Institute

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