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SpaGRA: Graph augmentation facilitates domain identification for spatially resolved transcriptomics.

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第一作者： Xue,Sun

第一单位： Center of Intelligent Medicine, School of Control Science and Engineering, Shandong University, Jinan, Shandong 250061, China.

作者： Xue,Sun ^[1] ; Wei,Zhang ^[1] ; Wenrui,Li ^[2] ; Na,Yu ^[1] ; Daoliang,Zhang ^[1] ; Qi,Zou ^[1] ; Qiongye,Dong ^[3] ; Xianglin,Zhang ^[4] ; Zhiping,Liu ^[1] ; Zhiyuan,Yuan ^[5] ; Rui,Gao ^[6]

作者单位： Center of Intelligent Medicine, School of Control Science and Engineering, Shandong University, Jinan, Shandong 250061, China. ^[1] MOE Key Lab of Bioinformatics and Bioinformatics Division of BNRIST, Department of Automation, Tsinghua University, Beijing 100084, China. ^[2] Institute of Precision Medicine, Peking University Shenzhen Hospital, Shenzhen, Guangdong 518036, China. ^[3] Department of Clinical Laboratory, The Second Hospital, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250033, China. ^[4] Institute of Science and Technology for Brain-Inspired Intelligence, Center for Medical Research and Innovation, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, Fudan University, Shanghai 200433, China. Electronic address: zhiyuan@fudan.edu.cn. ^[5] Center of Intelligent Medicine, School of Control Science and Engineering, Shandong University, Jinan, Shandong 250061, China. Electronic address: gaorui@sdu.edu.cn. ^[6]

关键词 Geometric contrastive learning Graph augmentation Multi-head graph attention networks Spatial domain identification Spatially resolved transcriptomics

医学主题词小鼠(Mice);动物(Animals);基因表达谱(Gene Expression Profiling);人类(Humans);软件(Software);算法(Algorithms)

DOI 10.1016/j.jgg.2024.09.015

PMID 39362628

发布时间 2026-03-20

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Journal of genetics and genomics = Yi chuan xue bao

2025年52卷1期

93-104页

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Journal of genetics and genomics = Yi chuan xue bao

2025年52卷1期

93-104页

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SpaGRA: Graph augmentation facilitates domain identification for spatially resolved transcriptomics.

Journal of genetics and genomics = Yi chuan xue bao

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SpaGRA: Graph augmentation facilitates domain identification for spatially resolved transcriptomics.

Journal of genetics and genomics = Yi chuan xue bao

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Journal of genetics and genomics = Yi chuan xue bao

相关期刊

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