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GNODEVAE: a graph-based ODE-VAE enhances clustering for single-cell data.

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第一作者： Zeyu,Fu

第一单位： State Key Laboratory of Trauma and Chemical Poisoning, Institute of Combined Injury, Chongqing Engineering Research Center for Nanomedicine, College of Preventive Medicine, Army Medical University, Chongqing, 400038, China. fuzeyu99@126.com.

作者： Zeyu,Fu ^[1] ; Chunlin,Chen ^[2] ; Song,Wang ^[3] ; Junping,Wang ^[4] ; Shilei,Chen ^[5]

作者单位： State Key Laboratory of Trauma and Chemical Poisoning, Institute of Combined Injury, Chongqing Engineering Research Center for Nanomedicine, College of Preventive Medicine, Army Medical University, Chongqing, 400038, China. fuzeyu99@126.com. ^[1] Department of Rehabilitation Medicine, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, China. ^[2] State Key Laboratory of Trauma and Chemical Poisoning, Institute of Combined Injury, Chongqing Engineering Research Center for Nanomedicine, College of Preventive Medicine, Army Medical University, Chongqing, 400038, China. ^[3] State Key Laboratory of Trauma and Chemical Poisoning, Institute of Combined Injury, Chongqing Engineering Research Center for Nanomedicine, College of Preventive Medicine, Army Medical University, Chongqing, 400038, China. wangjunping@tmmu.edu.cn. ^[4] State Key Laboratory of Trauma and Chemical Poisoning, Institute of Combined Injury, Chongqing Engineering Research Center for Nanomedicine, College of Preventive Medicine, Army Medical University, Chongqing, 400038, China. chen.shilei@foxmail.com. ^[5]

关键词 Clustering Graph attention networks Neural ordinary differential equation ScATAC-seq ScRNA-seq Variational autoencoders

医学主题词单细胞分析(Single-Cell Analysis);聚类分析(Cluster Analysis);软件(Software);算法(Algorithms);人类(Humans);序列分析, RNA(Sequence Analysis, RNA);计算生物学(Computational Biology)

DOI 10.1186/s12864-025-11946-7

PMID 40841610

发布时间 2025-08-25

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准确一般字义偏差语意偏离译文作用小提交