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BrAPI v2: real-world applications for data integration and collaboration in the breeding and genetics community.

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第一作者: Peter,Selby
第一单位: Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.
作者: Peter,Selby [1] ; Rafael,Abbeloos [2] ; Anne-Francoise,Adam-Blondon [3] ; Francisco J,Agosto-Pérez [1] ; Michael,Alaux [4] ; Isabelle,Alic [5] ; Khaled,Al-Shamaa [6] ; Johan Steven,Aparicio [7] ; Jan Erik,Backlund [8] ; Aldrin,Batac [9] ; Sebastian,Beier [10] ; Gabriel,Besombes [5] ; Alice,Boizet [11] ; Matthijs,Brouwer [12] ; Terry,Casstevens [13] ; Arnaud,Charleroy [5] ; Keo,Corak [14] ; Chaney,Courtney [15] ; Mariano,Crimi [8] ; Gouripriya,Davuluri [16] ; Kauê,de Sousa [17] ; Jeremy,Destin [4] ; Stijn,Dhondt [2] ; Ajay,Dhungana [18] ; Bert,Droesbeke [19] ; Manuel,Feser [20] ; Mirella,Flores-Gonzalez [21] ; Valentin,Guignon [17] ; Corina,Habito [8] ; Asis,Hallab [22] ; Jenna,Hershberger [15] ; Puthick,Hok [23] ; Amanda M,Hulse-Kemp [14] ; Lynn Carol,Johnson [13] ; Sook,Jung [24] ; Paul,Kersey [25] ; Andrzej,Kilian [23] ; Patrick,König [16] ; Suman,Kumar [16] ; Josh,Lamos-Sweeney [1] ; Laszlo,Lang [26] ; Matthias,Lange [16] ; Marie-Angélique,Laporte [17] ; Taein,Lee [24] ; Erwan,Le Floch [4] ; Francisco,López [27] ; Brandon,Madriz [28] ; Dorrie,Main [24] ; Marco,Marsella [27] ; Maud,Marty [4] ; Célia,Michotey [4] ; Zachary,Miller [13] ; Iain,Milne [29] ; Lukas A,Mueller [21] ; Moses,Nderitu [30] ; Pascal,Neveu [5] ; Nick,Palladino [31] ; Tim,Parsons [31] ; Cyril,Pommier [4] ; Jean-François,Rami [11] ; Sebastian,Raubach [29] ; Trevor,Rife [15] ; Kelly,Robbins [1] ; Mathieu,Rouard [17] ; Joseph,Ruff [25] ; Guilhem,Sempéré [32] ; Romil Mayank,Shah [33] ; Paul,Shaw [29] ; Becky,Smith [29] ; Nahuel,Soldevilla [9] ; Anne,Tireau [5] ; Clarysabel,Tovar [9] ; Grzegorz,Uszynski [23] ; Vivian Bass,Vega [26] ; Stephan,Weise [16] ; Shawn C,Yarnes [31] ; The BrAPI Consortium [34]
作者单位: Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA. [1] VIB Agro-incubator, Vlaams Instituut voor Biotechnologie (VIB), 9850 Nevele, Belgium. [2] IFB-core, Institut Français de Bioinformatique (IFB), CNRS, INSERM, INRAE, CEA, 91057 Evry, France.;Université Paris-Saclay, INRAE, BioinfOmics, URGI, 78026, Versailles, France. [3] Université Paris-Saclay, INRAE, BioinfOmics, URGI, 78026, Versailles, France. [4] MISTEA, University of Montpellier, INRAE, Institut Agro, 34000 Montpellier, France. [5] International Center for Agricultural Research in the Dry Areas (ICARDA), Dalia Bldg, Bashir El Kassar Street, VFPM+GJW, Bayrut, Lebanon. [6] International Center for Tropical Agriculture (CIAT), Cali, Valle del Cauca, Colombia. [7] Integrated Breeding Platform, 56237 El Batán, Texcoco, México, México. [8] Integrated Breeding Platform, 56237 El Batán, Texcoco, México, México.;Leafnode LLC, 56237 El Batán, Texcoco, México, México. [9] Institute of Bio- and Geosciences (IBG-4: Bioinformatics), CEPLAS, Forschungszentrum Jülich GmbH, Wilhelm Johnen Straße, 52428 Jülich, Germany.;Bioeconomy Science Center (BioSC), Forschungszentrum Jülich GmbH, 52428 Jülich, Germany. [10] CIRAD, UMR AGAP Institut, 34980, Montpellier, France.;AGAP Institut, CIRAD, INRAE, Institut Agro, Université de Montpellier, Montpellier, 34980, France. [11] Wageningen University and Research, Droevendaalsesteeg, Wageningen, 2, 6708 PB, Netherlands. [12] Buckler Lab and Institute for Genomic Diversity, Cornell University, Ithaca, NY 14853, USA. [13] USDA-ARS Genomics and Bioinformatics Research Unit, 5601 Sunnyside Avenue, Beltsville, MD 20705, USA. [14] Department of Plant and Environmental Sciences, Clemson University, 16 N Clemson Ave, Clemson, SC 29631, USA. [15] Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466 Seeland, Germany. [16] Bioversity International, Parc Scientifique Agropolis II, 34397 Montpellier, France. [17] College of Agriculture, Louisiana State University (LSU), 106 Martin D. Woodin Hall Baton Rouge, LA 70803, USA. [18] VIB Data Core, Vlaams Instituut voor Biotechnologie (VIB), 9052 Ghent, Belgium. [19] Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466 Seeland, Germany.;Graduate School DILS, Bielefeld Institute for Bioinformatics Infrastructure (BIBI), Postfach 10 01 31, 33501 Bielefeld, Germany. [20] The Boyce Thompson Institute, Ithaca, NY 14853, USA. [21] Institute of Bio- and Geosciences (IBG-4: Bioinformatics), CEPLAS, Forschungszentrum Jülich GmbH, Wilhelm Johnen Straße, 52428 Jülich, Germany.;Bingen Technical University of Applied Sciences, Berlinstraße, Bingen am Rhein, 109, 55411, Germany. [22] Diversity Arrays Technology (DArT), University of Canberra Kirinari Street, Bruce, ACT, 2617, Australia. [23] Department of Horticulture, Washington State University, Pullman, WA 99164, USA. [24] Royal Botanic Gardens, Kew, Richmond, London, TW9 3AE, England, UK. [25] Bingen Technical University of Applied Sciences, Berlinstraße, Bingen am Rhein, 109, 55411, Germany. [26] International Treaty on Plant Genetic Resources for Food and Agriculture, FAO, Viale delle Terme di Caracalla, 00153 Rome, Italy. [27] MrBot Software Solutions, Cartago, 30501, Costa Rica. [28] Department of Information and Computational Sciences, The James Hutton Institute, Invergowrie, Dundee, Scotland. [29] SEQART AFRICA, Old Naivasha road, 00100, Nairobi, Kenya. [30] Breeding Insight, Cornell University, Ithaca, NY 14853, USA. [31] CIRAD, UMR INTERTRYP, Montpellier, France INTERTRYP, Univ Montpellier, CIRAD, IRD, French Institute of Bioinformatics (IFB), Montpellier, 34980, France.;South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, 34980 Montpellier, France. [32] College of Agriculture and Life Sciences, North Carolina State University, Raleigh, NC 27695, USA. [33] The BrAPI Consortium, Cornell University, Ithaca, NY 14853, USA. [34]
DOI 10.1093/database/baaf048
PMID 40996713
发布时间 2026-03-09
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