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Orchestrating Spatial Transcriptomics Analysis with Bioconductor.

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第一作者: Helena L,Crowell
第一单位: National Center for Genomic Analysis, Barcelona, Spain.
作者单位: National Center for Genomic Analysis, Barcelona, Spain. [1] Biomedical Data Science Center, Lausanne University Hospital, Lausanne, Switzerland.;University of Lausanne, Lausanne, Switzerland. [2] Department of Biology, University of Padova, Padova, Italy. [3] Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland.;Swiss Institute of Bioinformatics, Zurich, Switzerland. [4] Division of Biostatistics, Department of Population Health Sciences, University of Utah, Salt Lake City, UT, United States. [5] Bioinformatics and Computational Biology Division, Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.;ACRF Cancer Biology and Stem Cells Division, Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.;Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia. [6] Channing Division of Network Medicine, Mass General Brigham, Boston, MA, United States. [7] Berlin Institute for Medical Systems Biology, Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany. [8] Fred Hutch Cancer Center, Seattle, WA, United States. [9] School of Mathematics and Statistics, The University of Sydney, Camperdown, NSW, Australia.;Sydney Precision Data Science Centre, The University of Sydney, Camperdown, NSW, Australia.;Charles Perkins Centre, The University of Sydney, Camperdown, NSW, Australia. [10] School of Mathematics and Statistics, The University of Sydney, Camperdown, NSW, Australia.;Sydney Precision Data Science Centre, The University of Sydney, Camperdown, NSW, Australia.;Centre for Cancer Research, The Westmead Institute for Medical Research, The University of Sydney, Camperdown, NSW, Australia. [11] Bioinformatics and Computational Biology Division, Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia. [12] Roswell Park Comprehensive Cancer Center, Buffalo, NY, United States. [13] Institute for Implementation Science in Population Health, City University of New York Graduate School of Public Health and Health Policy, New York, NY, United States.;Department of Epidemiology and Biostatistics, City University of New York Graduate School of Public Health and Health Policy, New York, NY, United States. [14] Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, United States. [15] Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, United States.;Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, United States.;Center for Computational Biology, Johns Hopkins University, Baltimore, MD, United States. [16] Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, United States.;Department of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, United States.;Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, United States. [17] Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, United States.;Department of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, Baltimore, MD, United States.;Solomon H. Snyder Department of Neuroscience, Johns Hopkins School of Medicine, Baltimore, MD, United States.;Johns Hopkins Kavli Neuroscience Discovery Institute, Baltimore, MD, United States. [18] Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, United States.;Department of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, Baltimore, MD, United States.;Solomon H. Snyder Department of Neuroscience, Johns Hopkins School of Medicine, Baltimore, MD, United States. [19] School of Mathematics and Statistics, The University of Sydney, Camperdown, NSW, Australia.;Sydney Precision Data Science Centre, The University of Sydney, Camperdown, NSW, Australia.;Charles Perkins Centre, The University of Sydney, Camperdown, NSW, Australia.;Centre for Cancer Research, The Westmead Institute for Medical Research, The University of Sydney, Camperdown, NSW, Australia. [20] Department of Electrical Engineer and Information Technology, University of Naples "Federico II", Naples, Italy. [21] Department of Statistical Sciences, University of Padova, Padova, Italy.;Padua Center for Network Medicine, University of Padova, Padova, Italy. [22] Department of Statistical Sciences, University of Bologna, Bologna, Italy. [23] Biomedical Data Science Center, Lausanne University Hospital, Lausanne, Switzerland.;University of Lausanne, Lausanne, Switzerland.;School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland. [24] Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, United States.;Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, United States.;Center for Computational Biology, Johns Hopkins University, Baltimore, MD, United States.;Malone Center for Engineering in Healthcare, Johns Hopkins University, Baltimore, MD, United States. [25] Department of Biostatistics, Boston University School of Public Health, Boston, MA, United States. [26]
DOI 10.1101/2025.11.20.688607
PMID 41332620
发布时间 2025-12-21
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