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deMEM: a novel divide-and-conquer framework based on de Bruijn graph for scalable multiple sequence alignment.

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第一作者： Yanming,Wei

第一单位： School of Computer Science and Technology, Xidian University, No. 266, Xinglong Section of Xifeng Road, Chang'an Zone, Xi'an, 710126, China.;Institute of Digital Health, Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, University of Electronic Science and Technology of China, No. 1, Chengdian Road, Kecheng Zone, Quzhou, 324003, China.

作者： Yanming,Wei ^[1] ; Zhaoyang,Huang ^[2] ; Pinglu,Zhang ^[3] ; Yizheng,Wang ^[3] ; Yan,Li ^[4] ; Liang,Yu ^[2] ; Quan,Zou ^[3]

作者单位： School of Computer Science and Technology, Xidian University, No. 266, Xinglong Section of Xifeng Road, Chang'an Zone, Xi'an, 710126, China.;Institute of Digital Health, Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, University of Electronic Science and Technology of China, No. 1, Chengdian Road, Kecheng Zone, Quzhou, 324003, China. ^[1] School of Computer Science and Technology, Xidian University, No. 266, Xinglong Section of Xifeng Road, Chang'an Zone, Xi'an, 710126, China. ^[2] Institute of Digital Health, Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, University of Electronic Science and Technology of China, No. 1, Chengdian Road, Kecheng Zone, Quzhou, 324003, China.;Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, No. 2006, Xiyuan Avenue, Pidu Zone, Chengdu, 610054, China. ^[3] School of Management, Xi'an Polytechnic University, No.19, Jinhua South Road, Xi'an, 710048, China. ^[4]

关键词 de Bruijn graph maximum exact match multiple sequence alignment parallel algorithm design

医学主题词序列比对(Sequence Alignment);软件(Software);算法(Algorithms);基因组学(Genomics);序列分析, DNA(Sequence Analysis, DNA);计算生物学(Computational Biology)

DOI 10.1093/gigascience/giaf163

PMID 41489486

发布时间 2026-02-13

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