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Utility of Droplet Digital PCR Assay for Quantitative Detection of Norovirus in Shellfish, from Production to Consumption in Guangxi, China

摘要Objective Shellfish are recognized as important vehicles of norovirus-associated gastroenteritis.The present study aimed to monitor norovirus contamination in oysters along the farm-to-fork continuum in Guangxi,a major oyster production area in Southwestern China.Methods Oyster samples were collected monthly from farms,markets,and restaurants,from January to December 2016.Norovirus was detected and quantified by one-step reverse transcription-droplet digital polymerase chain reaction (RT-ddPCR).Results A total of 480 oyster samples were collected and tested for norovirus genogroups Ⅰ and Ⅱ.Norovirus was detected in 20.7% of samples,with genogroup Ⅱ predominating.No significant difference was observed in norovirus prevalence among different sampling sites.The norovirus levels varied widely,with a geometric mean of 19,300 copies/g in digestive glands.Both norovirus prevalence and viral loads showed obvious seasonality,with a strong winter bias.Conclusion This study provides a systematic analysis of norovirus contamination'from the farm to the fork'in Guangxi.RT-ddPCR can be a useful tool for detection and quantification of low amounts of norovirus in the presence of inhibitors found particularly in foodstuffs.This approach will contribute to the development of strategies for controlling and reducing the risk of human illness resulting from shellfish consumption.

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作者单位 Guangxi Zhuang Autonomous Region Center for Disease Prevention and Control, Nanning 530028, Guangxi, China [1]
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DOI 10.3967/bes2018.096
发布时间 2019-01-07(万方平台首次上网日期,不代表论文的发表时间)
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生物医学与环境科学(英文版)

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