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Identification of potential immune-related prognostic biomarkers of lung cancer using gene co-expression network analysis

摘要Objective The objective of this study was to identify new carcinogenetic hub genes and develop the integration of differentially expressed genes to predict the prognosis of lung cancer. Methods GSE139032 microarray data packages were downloaded from the Gene Expression Omnibus for planning, testing, and review of data. We identified KRT6C, LAMC2, LAMB3, KRT6A, and MYEOV from a key module for validation. Results We found that the five genes were related to a poor prognosis, and the expression levels of these genes were associated with tumor stage. Furthermore, Kaplan-Meier plotter showed that the five hub genes had better prognostic values. The mean levels of methylation in lung adenocarcinoma (LUAD) were significantly lower than those in healthy lung tissues for the hub genes. However, gene set enrichment analysis (GSEA) for single hub genes showed that all of them were immune-related. Conclusion Our findings demonstrated that KRT6C, LAMC2, LAMB3, KRT6A, and MYEOV are all candidate diagnostic and prognostic biomarkers for LUAD. They may have clinical implications in LUAD patients not only for the improvement of risk stratification but also for therapeutic decisions and prognosis prediction.

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作者 Aixia Chen [1] Shengnan Zhao [2] Fei Zhou [1] Hongying Lv [1] Donghai Liang [1] Tao Jiang [1] Rui Liu [1] Lijin Zhu [1] Jingyu Cao [3] Shihai Liu [4] Hongsheng Yu [1] 学术成果认领
作者单位 Department of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao 266000, China [1] Department of Medcine Oncology, Qinghai University Affilated Hospital, Qinghai 810000, China [2] Department of Hepatobilary and Pancreatic Surgery, The Affiliated Hospital of Qingdao University, Qingdao 266000, China [3] Department of Central Laboratory, The Affiliated Hospital of Qingdao University, Qingdao 266000, China [4]
DOI 10.1007/s10330-020-0437-7
发布时间 2021-01-12
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