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Reconstruction of Gene Regulatory Networks Based on Two-Stage Bayesian Network Structure Learning Algorithm

摘要In the post-genomic biology era, the reconstruction of gene regulatory networks from microarray gene expression data is very important to understand the underlying biological system, and it has been a challenging task in bioinformatics. The Bayesian network model has been used in reconstructing the gene regulatory network for its advantages, but how to determine the network structure and parameters is still important to be explored. This paper proposes a two-stage structure learning algorithm which integrates immune evolution algorithm to build a Bayesian network .The new algorithm is evaluated with the use of both simulated and yeast cell cycle data. The experimental results indicate that the proposed algorithm can find many of the known real regulatory relationships from literature and predict the others unknown with high validity and accuracy.

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作者单位 College of Computer Science and Technology, Jilin University, Changchun 130012, P. R. China [1]
DOI 10.1016/S1672-6529(08)60103-1
发布时间 2009-06-09(万方平台首次上网日期,不代表论文的发表时间)
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仿生工程学报(英文版)

仿生工程学报(英文版)

2009年6卷1期

86-92页

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