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Systems Biology Approach Pinpoints Minimum Requirements for Auxin Distribution during Fruit Opening

摘要The phytohormone auxin is implied in steering various developmental decisions during plant morphogenesis in a concentration-dependent manner.Auxin maxima have been shown to maintain meristematic activity,for example,of the root apical meristem,and position new sites of outgrowth,such as during lateral root initiation and phyllotaxis.More recently,it has been demonstrated that sites of auxin minima also provide positional information.In the developingArabidopsis fruit,auxin minima are required for correct differentiation of the valve margin.It remains unclear,however,how this auxin minimum is generated and maintained.Here,we employ a systems biology approach to model auxin transport based on experimental observations.This allows us to determine the minimal requirements for its establishment.Our simulations reveal that two alternative processes-which we coin "flux-barrier" and "flux-passage"-are both able to generate an auxin minimum,but under different parameter settings.Both models are in principle able to yield similar auxin profiles but present qualitatively distinct patterns of auxin flux.The models were tested by tissue-specific inducible ablation,revealing that the auxin minimum in the fruit is most likely generated by a flux-passage process.Model predictions were further supported through 3D PIN localization imaging and implementing experimentally observed transporter localization.Through such an experimental-modeling cycle,we predict how the auxin minimum gradually matures during fruit development to ensure timely fruit opening and seed dispersal.

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作者单位 Crop Genetics, John Innes Centre, Norwich NR4 7UH, UK [1] Computational and Systems Biology, John Innes Centre, Norwich NR4 7UH, UK;Centre of Excellence in Computational and Experimental Developmental Biology, Institute of Biotechnology, University of Helsinki, 00014 Helsinki, Finland [2] Cell and Developmental Biology, John Innes Centre, Norwich NR4 7UH, UK [3] Computational and Systems Biology, John Innes Centre, Norwich NR4 7UH, UK;School of Biosciences, Cardiff University, Cardiff CF10 3AX, Wales, UK [4]
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发布时间 2019-07-24(万方平台首次上网日期,不代表论文的发表时间)
基金项目
the Institute Strategic Programme grants ((BB/J004588/1 and BB/P013511/1) from the Biotechnology and Biological Sciences Research Council (BBSRC)) :from the FACCE ERA-NET+ and BBSRC
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分子植物(英文版)

分子植物(英文版)

2019年12卷6期

863-878页

SCIMEDLINEISTICCSCDCABP

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