TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

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摘要The rapid development of high-throughput sequencing techniques has led biology into the big-data era.Data analyses using various bioinformatics tools rely on programming and command-line environments,which are challenging and time-consuming for most wet-lab biologists.Here,we present TBtools (a Toolkit for Biologists integrating various biological data-handling tools),a stand-alone software with a userfriendly interface.The toolkit incorporates over 130 functions,which are designed to meet the increasing demand for big-data analyses,ranging from bulk sequence processing to interactive data visualization.A wide variety of graphs can be prepared in TBtools using a new plotting engine ("JIGplot") developed to maximize their interactive ability;this engine allows quick point-and-click modification of almost every graphic feature.TBtools is platform-independent software that can be run under all operating systems with Java Runtime Environment 1.6 or newer.It is freely available to non-commercial users at https://github.com/CJ-Chen/TBtools/releases.

作者 Chengjie Chen ^[1] Hao Chen ^[2] Yi Zhang ^[1] Hannah R.Thomas ^[3] Margaret H.Frank ^[3] Yehua He ^[4] Rui Xia ^[1] 学术成果认领

作者单位 State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, Guangdong 510640,China;Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou, Guangdong 510640, China;Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in South China, Ministry of Agriculture and Rural Affair, South China Agricultural University, Guangzhou, Guangdong 510640, China;College of Horticulture, South China Agricultural University, Guangzhou, Guangdong 510640, China ^[1] Oilseed Crops Institute, Hunan Agricultural University, Changsha 410128, China ^[2] Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA ^[3] Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou, Guangdong 510640, China;Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in South China, Ministry of Agriculture and Rural Affair, South China Agricultural University, Guangzhou, Guangdong 510640, China;College of Horticulture, South China Agricultural University, Guangzhou, Guangdong 510640, China ^[4]

关键词 TBtools bioinformatics big data data visulization gene family

栏目名称 Resource Articles

发布时间 2020-09-25

基金项目

This work was funded by the National Key Research and Developmental Program of China This work is also supported by awards to R X.,Y H.,and H from the National Key Research and Developmental Program of China the National Science Foundation of China the Special Support Program of Guangdong Province the Key-Area Research and Development Program of Guangdong Province and the Guangzhou Science and Technology Key Project Support to M comes from the NSF Faculty Early Career Development Program

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