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Detection of YMDD mutants using universal template real-time PCR

摘要AIM: To establish a rapid and accurate method for the detection of lamivudine-resistant mutations in hepatitis B virus and monitor of lamivudine resistance during lamivudine treatment in patients with chronic hepatitis B virus infection.METHODS: We established a real-time PCR method using a universal template and TaqMan probe to detect YMDD mutants. Variants of YVDD and YIDD were tested by individual reactions (reaction Ⅴ and reaction Ⅰ) and total hepatitis B viruses were detected in another reaction for control (reaction C). Results were determined by △Ct<3.5 (△Ct = Ct of reaction Ⅴ or Ⅰ - Ct of reaction C). Clones of the HBV polymerase gene containing different YMDD mutations were tested. Serum samples from 163 lamivudine-treated patients with chronic hepatitis B virus infection were detected using this method and the results were confirmed by DNA sequencing.RESULTS: As many as 1000 copies per milliliter of wide-type plasmid were detected and nonspecific priming was excluded. In the 163 samples from patients treated with lamivudine, lamivudine-resistant mutations were detected in 51 samples.CONCLUSION: This universal real-time PCR is a rapid and accurate method for quantification of YMDD mutants of HBV virus in lamivudine-treated patients and can be used to monitor lamivudine-resistant mutations before and during lamivudine therapy.

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作者单位 Jiangsu Oil Field Hospital, Shaobo, Jiangdu 225261, Jiangsu Province, China [1] Fosun Diagnositcs, Shanghai 200233, China [2]
分类号 R5
栏目名称 RAPID COMMUNICATION
发布时间 2006-07-31
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