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The genetic control of glabrous glume during African rice domestication

摘要African cultivated rice,Oryza glaberrima,is characterized by its glabrous glumes.During domestication,the pubescent glumes of its wild ancestor,Oryza barthii,lost their trichomes,and in this study,we show that glabrous glume 5(GLAG5),a WUSCHEL-like homeobox transcription factor gene on chromosome 5,is required for trichome development.DNA methylation associated with an hAT transposable element inserted in the promoter region of GLAG5 is found to reduce its expression,leading to the formation of glabrous glumes and leaves in African cultivated rice.Among 82 African cultivated rice varieties investigated in this study,59(approximately 71%)lines exhibit glabrous glumes and harbor the hAT transposon;however,the other 23 varieties(approximately 29%),which exhibit pubescent glumes,lack the hAT transposon,indi-cating that glag5 had undergone strong artificial selection.The πw/πc ratios also show the hAT transposon insertions influence the genetic diversity of an approximately 150-kb interval encompassing the GLAG5 locus.The identification of the GLAG5 gene provides new insights into the domestication of cultivated rice in Africa.We speculate that the selection of varieties with mutations in their promoter regions is an important aspect of crop domestication.

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作者 Leqin Chang [1] Min Hu [1] Jing Ning [1] Wei He [1] Jiayu Gao [1] Marie-Noelle Ndjiondjop [2] Yongcai Fu [1] Fengxia Liu [3] Hongying Sun [1] Ping Gu [1] Chuanqing Sun [3] Zuofeng Zhu [1] 学术成果认领
作者单位 State Key Laboratory for Agrobiotechnology,National Center for Evaluation of Agricultural Wild Plants(Rice),Department of Plant Genetics and Breeding,China Agricultural University,Beijing 100193,China [1] Africa Rice Center,Cotonou,Benin [2] State Key Laboratory of Plant Physiology and Biochemistry,China Agricultural University,Beijing 100193,China [3]
栏目名称 Original Research
发布时间 2022-06-28
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2022年49卷5期

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