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Strategy for cysteine-targeting covalent inhibitors screening using in-house database based LC-MS/MS and drug repurposing

摘要Targeted covalent inhibitors,primarily targeting cysteine residues,have attracted great attention as potential drug candidates due to good potency and prolonged duration of action.However,their dis-covery is challenging.In this research,a database-assisted liquid chromatography-tandem mass spec-trometry(LC-MS/MS)strategy was developed to quickly discover potential cysteine-targeting compounds.First,compounds with potential reactive groups were selected and incubated with N-acetyl-cysteine in microsomes.And the precursor ions of possible cysteine-adducts were predicted based on covalent binding mechanisms to establish in-house database.Second,substrate-independent product ions produced from N-acetyl-cysteine moiety were selected.Third,multiple reaction monitoring scan was conducted to achieve sensitive screening for cysteine-targeting compounds.This strategy showed broad applicability,and covalent compounds with diverse structures were screened out,offering structural resources for covalent inhibitors development.Moreover,the screened compounds,norket-amine and hydroxynorketamine,could modify synaptic transmission-related proteins in vivo,indicating their potential as covalent inhibitors.This experimental-based screening strategy provides a quick and reliable guidance for the design and discovery of covalent inhibitors.

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作者 Xiaolan Hu [1] Jian-Lin Wu [2] Quan He [2] Zhi-Qi Xiong [3] Na Li [2] 学术成果认领
作者单位 State Key Laboratory of Quality Research in Chinese Medicine,Macau University of Science and Technology,Taipa,Macau SAR,999078,China;College of Environment and Climate,Institute of Mass Spectrometry and Atmospheric Environment,Guangdong Provincial Key Laboratory of Speed Capability Research,Jinan University,Guangzhou,510632,China [1] State Key Laboratory of Quality Research in Chinese Medicine,Macau University of Science and Technology,Taipa,Macau SAR,999078,China [2] Center for Excellence in Brain Science and Intelligence Technology,Institute of Neuroscience and State Key Laboratory of Neuroscience,Chinese Academy of Sciences,Shanghai,200031,China [3]
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DOI 10.1016/j.jpha.2024.101045
发布时间 2025-07-16(万方平台首次上网日期,不代表论文的发表时间)
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药物分析学报(英文版)

药物分析学报(英文版)

2025年15卷3期

637-650页

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