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Bridging chemical space and biological efficacy:advances and challenges in applying generative models in structural modification of natural products

摘要Natural products(NPs)are invaluable resources for drug discovery,characterized by their intricate scaffolds and diverse bioactivities.Al drug discovery&design(AIDD)has emerged as a transformative approach for the rational structural modification of NPs.This review examines a variety of molecular generation models since 2020,focusing on their potential applications in two primary scenarios of NPs structure modification:modifications when the target is identified and when it remains unidentified.Most of the molecular generative models discussed herein are open-source,and their applicability across different domains and technical feasibility have been evaluated.This evaluation was accomplished by integrating a limited number of research cases and successful practices observed in the molec-ular optimization of synthetic compounds.Furthermore,the challenges and prospects of employing molecular generation modeling for the structural modification of NPs are discussed.

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作者 Chuan-Su Liu [1] Bing-Chao Yan [2] Han-Dong Sun [2] Jin-Cai Lu [3] Pema-Tenzin Puno [2] 学术成果认领
作者单位 School of Traditional Chinese Materia Medica,Shenyang Pharmaceutical University,Shenyang 110016,Liaoning,China;State Key Laboratory of Phy-tochemistry and Natural Medicines,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650201,Yunnan,China [1] State Key Laboratory of Phy-tochemistry and Natural Medicines,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650201,Yunnan,China [2] School of Traditional Chinese Materia Medica,Shenyang Pharmaceutical University,Shenyang 110016,Liaoning,China [3]
DOI 10.1007/s13659-025-00521-y
发布时间 2025-12-11(万方平台首次上网日期,不代表论文的发表时间)
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