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Decoding the Complete Mitogenome of Odorrana nasuta(Anura:Ranidae):Phylogenetic Insights and Mitogenome Rearrangement Revealed via a Novel Genome Capture Method

摘要Mitogenomes have been widely used in phylogenetic and taxonomic research,due to their maternal inheritance,accelerated evolutionary rates,compact circular structure,and the absence of introns.Although their utility is well-established,efficient mitogenome sequencing still poses a challenge for evolutionary studies.Here,we presented a novel hybridization capture protocol that enables high-fidelity sequencing of the complete mitogenome(16 535 bp)of Odorrana nasuta.This genome exhibits typical anuran characteristics,including an A+T nucleotide bias(56.37%)and conserved gene composition.Notably,we identified a lineage-specific trnH transposition event that reorganizes the typical gene order into a unique trnH-trnL1-trnT-trnP-trnF cluster,which may be a potential synapomorphic trait for the genus Odorrana.Phylogenetic reconstruction using 13 protein-coding genes from 59 anuran species strongly supported the monophyly of Ranidae and its constituent genera(Odorrana,Rana,Lithobates,Amolops,Pelophylax,Glandirana),yet reveals the incongruence in the placement of Hylarana.The conflicting topologies observed for Hylarana and Glandirana across different studies highlight critical methodological limitations,including taxonomic sampling biases and data type dependency,which collectively compromise phylogenetic resolution.By integrating mitogenomic structure signatures with sequence-based phylogenies,this work advances our understanding of the systematics within Odorrana and highlights the need of multi-locus genomic datasets for resolving deep phylogenetic conflicts within Ranidae.

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作者 Ganggang YANG [1] Chong CUI [2] Qiuya WANG [1] Jiaoying HE [1] Baiyun XUE [1] Zhengfei WANG [3] Xiaohong CHEN [1] Zhuo CHEN [1] 学术成果认领
作者单位 The Observation and Research Field Station of Taihang Mountain Forest Ecosystems of Henan Province,College of Life Sciences,Henan Normal University,Xinxiang 453007,Henan,China [1] The Observation and Research Field Station of Taihang Mountain Forest Ecosystems of Henan Province,College of Life Sciences,Henan Normal University,Xinxiang 453007,Henan,China;Jiangsu Key Laboratory for Bioresources of Saline Soils,Jiangsu Synthetic Innovation Center for Coastal Bio-agriculture,Jiangsu Provincial Key Laboratory of Coastal Wetland Bioresources and Environmental Protection,School of Wetland,Yancheng Teachers University,Yancheng 224001,Jiangsu,China [2] Jiangsu Key Laboratory for Bioresources of Saline Soils,Jiangsu Synthetic Innovation Center for Coastal Bio-agriculture,Jiangsu Provincial Key Laboratory of Coastal Wetland Bioresources and Environmental Protection,School of Wetland,Yancheng Teachers University,Yancheng 224001,Jiangsu,China [3]
DOI 10.3724/ahr.2095-0357.2025.0010
发布时间 2025-10-24(万方平台首次上网日期,不代表论文的发表时间)
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亚洲两栖爬行动物研究(英文版)

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