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Comprehensive genomic identification and functional analysis of bHLH transcription factors in Ganoderma lucidum

摘要Objective:The basic helix-loop-helix(bHLH)transcription factors(TFs)are pivotal in regulating fungal growth,development,and secondary metabolism.However,the knowledge about the Ganoderma lucidum bHLHs(GlbHLHs)in ganoderic acid(GA)biosynthesis of G.lucidum was limited.This study aimed to explore the functions of bHLH genes in ganoderic acid biosynthesis during G.lucidum growth develop-ment.Methods:First,the genome-wide identification of GlbHLHs was performed through Hidden Markov model searches and Two-way blast.Furthermore,through physicochemical properties,gene structure,and phy-logenetic analysis,as well as combining the transcriptome and metabolome data from different develop-mental stages of G.lucidum,candidate GlbHLHs were screened.Subsequently,their regulatory roles in ganoderic acid biosynthesis were explored using yeast one-hybrid and dual-luciferase reporter assays.Results:A total of 11 GlbHLH members were characterized in G.lucidum.The upstream promoter regions of these genes enriched hormones and abiotic stress responsive elements.Although individual ganoderic acid monomers demonstrated marked differences in accumulation patterns across specific growth phases and tissue types,overall,the total GA content was consistently higher in caps than in stipes throughout development.In addition,all GlbHLHs exhibited high expression in whole G.lucidum from the pri-mordium to maturation stages.Among them,GlbHLH5 and GlbHLH7 showed the highest expression in any stage and highly correlated with key genes associated with GA pathway.Functional validation through dual-luciferase assays and yeast one-hybrid experiments had demonstrated that GlbHLH5 acti-vated the P2 region of the lanosterol synthase promoter,while GlbHLH7 activated the promoters of squa-lene epoxidase and squalene synthase.Conclusion:Compared to plants,G.lucidum harbored a small number of bHLH members but all high expression in any stages.Additionally,GlbHLH5 and GlbHLH7 with the highest expression among GlbHLHs showed activation in regulating the biosynthesis of GA.These results provide a theoretical ref-erence for further research on ganoderic acid regulation in G.lucidum,and thereby providing a molecular foundation for enhancing ganoderic acid yield to optimize the medicinal value of G.lucidum.

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作者 Jun Li [1] Xuewen Zhu [1] Yupeng Du [2] Wenxiao Chen [2] Jing Xu [3] Ying Wang [3] Shasha Zhou [4] Zhichao Xu [2] Shuangcheng Ma [5] Zhenhao Li [6] Wei Sun [1] Yaolei Mi [7] 学术成果认领
作者单位 State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs,Institute of Chinese Materia Medica,China Academy of Chinese Medical Sciences,Beijing 100700,China;Key Laboratory of Beijing for Identification and Safety Evaluation of Chinese Medicine,Institute of Chinese Materia Medica,China Academy of Chinese Medical Sciences,Beijing 100700,China [1] College of Life Science,Northeast Forestry University,Harbin 150040,China [2] ShouXianGu Pharmaceutical Co.,Ltd.,Wuyi 321200,China [3] Key Laboratory of Biological Breeding and Exploitation of Edible and Medicinal Mushrooms,Wuyi 321200,China [4] Chinese Pharmacopoeia Commission,Beijing 100061,China;State Key Laboratory of Drug Regulatory Science,Beijing 100061,China [5] ShouXianGu Pharmaceutical Co.,Ltd.,Wuyi 321200,China;Key Laboratory of Biological Breeding and Exploitation of Edible and Medicinal Mushrooms,Wuyi 321200,China [6] State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs,Institute of Chinese Materia Medica,China Academy of Chinese Medical Sciences,Beijing 100700,China;Key Laboratory of Beijing for Identification and Safety Evaluation of Chinese Medicine,Institute of Chinese Materia Medica,China Academy of Chinese Medical Sciences,Beijing 100700,China;College of Life Science,Northeast Forestry University,Harbin 150040,China [7]
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DOI 10.1016/j.chmed.2025.05.005
发布时间 2026-04-01(万方平台首次上网日期,不代表论文的发表时间)
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2026年18卷1期

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