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A reproducible and sensitive method for generating high-quality transcriptomes from single whitefly salivary glands and other low-input tissues

摘要Transcriptomic studies are an important tool for understanding the molecular pathways underlying host plant use by agricultural pests,including vectors of damaging plant pathogens.Thus far,bulk RNA-Seq has been the main approach for non-model in-sects.This method relies on pooling large numbers of whole organisms or hundreds of in-dividually dissected organs.The latter approach is logistically challenging,may introduce artifacts of handling and storage,and is not compatible with biological replication.Here,we tested an approach to generate transcriptomes of individual salivary glands and other low-input body tissues from whiteflies(Bemisia tabaci MEAM1),which are major vectors of plant viruses.By comparing our outputs to published bulk RNA-Seq datasets for whole whitefly bodies and pools of salivary glands,we demonstrate that this approach recov-ers similar numbers of transcripts relative to bulk RNA-Seq in a tissue-specific manner,and for some metrics,exceeds performance of bulk tissue RNA-Seq.Libraries generated from individual salivary glands also yielded additional novel transcripts not identified in pooled salivary gland datasets,and had hundreds of enriched transcripts when compared with whole head tissues.Overall,our study demonstrates that it is feasible to produce high quality,replicated transcriptomes of whitefly salivary glands and other low-input tissues.We anticipate that our approach will expand hypothesis-driven research on salivary glands of whiteflies and other Hemiptera,thus enabling novel control strategies to disrupt feeding and virus transmission.

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作者 Marco Gebiola [1] Brandon H.Le [2] Kerry E.Mauck [1] 学术成果认领
作者单位 Department of Entomology,University of California Riverside,Riverside,California [1] Department of Botany and Plant Sciences,University of California Riverside,Riverside,California;Institute of Integrative Genome Biology,University of California Riverside,Riverside,California,USA [2]
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DOI 10.1111/1744-7917.13008
发布时间 2022-11-11(万方平台首次上网日期,不代表论文的发表时间)
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中国昆虫科学(英文版)

中国昆虫科学(英文版)

2022年29卷5期

1318-1328页

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