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Systematics of the avian family Alaudidae using multilocus and genomic data

摘要The family Alaudidae,larks,comprises 93-100 species(depending on taxonomy)that are widely distributed across Africa and Eurasia,with single species extending their ranges to North and northernmost South America and Australia.A decade-old molecular phylogeny,comprising~80%of the species,revealed multiple cases of parallel evolution and large variation in rates of morphological evolution,which had misled taxonomists into creating many non-monophyletic genera.Here,we reconstruct the phylogeny of the larks,using a dataset covering one mitochondrial and 16 nuclear loci and comprising all except one of the currently recognised species as well as several recently proposed new species(in total 133 taxa;not all loci available for all species).We provide additional support using genome-wide markers to infer a genus-level phylogeny based on near-complete generic sampling(in total 51 samples of 44 taxa across 40 species).Our results confirm the previous findings of rampant morphological convergence and divergence,and reveal new cases of paraphyletic genera.We propose a new subfamily classification,and also that the genus Mirafra is divided into four genera to produce a more balanced generic classification of the Alaudidae.Our study supports recently proposed species splits as well as some recent lumps,while also questioning some of the latter.This comprehensive phylogeny will form an important basis for future studies,such as comparative studies of lark natural history,ecology,evolution and conservation.

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作者 Per Alstr?m [1] Zeinolabedin Mohammadi [2] Erik D.Enbody [3] Martin Irestedt [4] Derek Engelbrecht [5] Pierre-André Crochet [6] Alban Guillaumet [7] Lo?s Rancilhac [8] B.Irene Tieleman [9] Urban Olsson [10] Paul F.Donald [11] Martin Stervander [12] 学术成果认领
作者单位 Animal Ecology,Department of Ecology and Genetics,Evolutionary Biology Centre,Uppsala University,Norbyv?gen 18D,SE-752 36,Uppsala,Sweden;Key Laboratory of Zoological Systematics and Evolution,Institute of Zoology,Chinese Academy of Sciences,Beijing,100101,China [1] Department of Biology,Faculty of Sciences,Golestan University,Gorgan,Golestan,Iran [2] Department of Medical Biochemistry and Microbiology,Uppsala University,751 23,Uppsala,Sweden;Department of Biomolecular Engineering,University of California,Santa Cruz,95060,Santa Cruz,CA,USA [3] Department of Bioinformatics and Genetics,Swedish Museum of Natural History,P.O.Box 50007,SE-104 05,Stockholm,Sweden [4] Department of Biodiversity,University of Limpopo,Private Bag X1106,Sovenga,0727,South Africa [5] CEFE,CNRS,Univ Montpellier,EPHE IRD,Montpellier,France [6] Department of Biological&Environmental Sciences,Troy University,Troy,AL,36082,USA [7] Animal Ecology,Department of Ecology and Genetics,Evolutionary Biology Centre,Uppsala University,Norbyv?gen 18D,SE-752 36,Uppsala,Sweden [8] Groningen Institute for Evolutionary Life Sciences,University of Groningen,Nijenborgh 7,9747 AG,Groningen,the Netherlands [9] Department of Biological and Environmental Sciences,University of Gothenburg,P.O.Box 463,SE-405 30,Gothenburg,Sweden;Gothenburg Global Biodiversity Centre,P.O.Box 461,SE-405 30,Gothenburg,Sweden [10] BirdLife International,The David Attenborough Building,Pembroke St,Cambridge,CB2 3QZ,UK;Department of Zoology,University of Cambridge,Downing Street,Cambridge,CB2 3EJ,UK [11] Bird Group,Natural History Museum,Akeman Street,Tring,Hertfordshire,HP23 6AP,United Kingdom [12]
发布时间 2023-06-26
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