rDNA-RFLP多酶切技术用于人类致病相关毛孢子菌种间鉴定初探
Primary exploration on identification of pathogenic Trichosporon spp. with rDNA-RFLP analysis
摘要目的 探讨rDNA-ITS/IGS1-RFLP多酶切技术构建毛孢子菌的酶切谱系并进行聚类分析,尝试将该方法用于人类致病相关毛孢子菌的快速种间鉴定.方法 收集8种14株毛孢子菌,对其进行rDNA-ITS/IGS1扩增测序,并分别应用HaeⅢ、Hha Ⅰ、HaeⅢ和Hha Ⅰ双酶、HinfⅠ、Msp Ⅰ和Taq Ⅰ对扩增片段进行RFLP酶切.结果 rDNA-ITS-RFLP多酶切可将8种毛孢子菌分为不同进化分支的4个亚类,而rDNA-IGS1-RFLP多酶切则可实现8种14株毛孢子菌准确的种间鉴定,并实现对部分进化距离较远的阿萨希毛孢子菌基因型之间的区分.结论 rDNA-ITS/IGS1-RFLP多酶切技术有望用于毛孢子菌属种水平的快速鉴定.
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abstractsObjective To genotype Trichosporon spp. with rDNA-ITSAGSl-RFLP analysis followed by cluster analysis, and attempt to apply this method to rapid species identification of human pathogenic Trichosporon spp.. Methods Fourteen strains of Trichosporon, which belonged to 8 species, were collected. The rDNA-ITS/IGSl regions were amplified by PCR and sequenced. Simultaneously, the amplicons were digested separately with restriction enzymes, including Hae III, Hha I , Hae IH and Hha I , Hinf I , Msp I and Taq I . Results The 8 species of Trichosporon could be classified into 4 subgroups with rDNA-ITS-RFLP, while inter-species identification of all the 14 strains from 8 species of Trichosporon could be realized with rDNA-IGSl-RFLP. Also, those genotypes of T. asahii which had relative long phylogenic distance could even be discriminated with rDNA-IGSl-RFLP. Conclusion The rDNA-ITS/IGSl-RFLP analysis is expected to be used in rapid interspecific identification of genus Trichosporon.
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