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Genomic insights into the diversity of rice cultivars developed in Heilongjiang Province,China

摘要Amid the rapid increase of the global population and the quest for sustainable agriculture,the need for enhanced rice breeding strategies has become increasingly pronounced,particularly in Heilongjiang,China's foremost rice-producing province,renowned for its premium temperate japonica rice.Here,we conducted an extensive genomic investigation of the elite rice cultivars developed in Heilongjiang Province.Using whole-genome re-sequencing of a total of 376 representative cultivars from Heilongjiang,of which 14 were developed by a single research group,we identified 4.9 million single nucleotide polymorphisms(SNPs)and 0.98 million insertions and deletions(InDels),offering a comprehensive perspective on genetic diversity and population structure.We classified the 376 rice cultivars into five subgroups based on their breeding years.Recently bred cultivars,assigned to subgroups HLJ-IV-1 and HLJ-IV-2,showed notable genetic differentiation.Through a selective sweep analysis,significant genomic variation in genes such as OsACBP5,Os4CL5,and GFR1 was pinpointed,reflecting a concerted effort in selecting for broad-spectrum disease resistance and enhanced tillering capacity.Furthermore,to identify the strengths and areas for improvement within those series,we conducted an exhaustive analysis of aromatic compounds and their corresponding genes OsODC and OsBadh2,as well as the advantageous long-grain gene OsGL3.1 haplotype within Hagengdao7.Additionally,strategies for reducing plant height through the introduction of the sd1 gene have been elucidated.With a commitment to expediting the development of superior rice cultivars,our discoveries are poised to raise the sensory attributes and nutritional profile of rice,thereby bolstering the resilience and sustainability of global food systems.

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作者 Yuhan ZHOU [1] Naixin LIU [2] Jiaqi YANG [2] Baicui CHEN [3] Chengxin LI [3] Fanshan BU [3] Sanling WU [4] Ziqi ZHOU [1] Qingtao YU [3] Qingyao SHU [1] 学术成果认领
作者单位 State Key Laboratory of Rice Biology&Breeding,Zhejiang Provincial Key Laboratory of Crop Germplasm Innovation and Utilization,the Advanced Seed Institute,Zhejiang University,Hangzhou 310058,China [1] Beet Quality Inspection and Test Center Ministry of Agriculture and Rural Affairs,College of Advanced Agriculture and Ecological Environment,Heilongjiang University,Harbin 150080,China [2] Harbin Academy of Agricultural Sciences,Harbin 150080,China [3] Analysis Center of Agrobiology and Environmental Sciences,Faculty of Agriculture,Life and Environment Sciences,Zhejiang University,Hangzhou 310058,China [4]
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DOI 10.1631/jzus.B2400339
发布时间 2026-03-26(万方平台首次上网日期,不代表论文的发表时间)
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浙江大学学报(英文版)(B辑:生物医学和生物技术)

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