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Varied Transcriptional Efficiencies of Multiple Arabidopsis U6 Small Nuclear RNA Genes

摘要Arabidopsis U6 small nuclear RNA (snRNA) promoters are those transcribed by RNA polymerase Ⅲ, but all the core elements for transcriptional initiation are located in the 5' promoter region. Previously, three Arabidopsis U6 snRNA genes (U6-1, U6-26, and U6-29) were identified. Herein, we have further identified three new U6 loci (U6-4, U6-5, and U6-6) in the Arabidopsis genome. Alignment of these revealed that the upstream sequence element and TATA elements were contained in six U6 promoters. In addition, a unique, highly conserved element named the "CAT"element was observed in the promoter region. To understand the expression patterns of these U6 genes in Arabidopsis, we fused these promoters to the DNA segment of β-glucuronidase and then transferred these six constructs into Arabidopsis. Real-time reverse transcription-polymerase chain reaction analysis of these fused transcripts indicated that the newly identified U6 genes are active in Arabidopsis and that the U6-26 promoter seems to have higher transcriptional activity in leaf, stem, flower and silique. These results help to understand the function of these U6 snRNAs in Arabidopsis.

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作者单位 SJTU-SIBS-PSU Joint Center for Life Sciences, Key Laboratory of Microbial Metabolism, Ministry of Education, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China;School of Life Sciences, Shanghai University, Shanghai 200240,China [1] School of Life Sciences, Shanghai University, Shanghai 200444, China [2] SJTU-SIBS-PSU Joint Center for Life Sciences, Key Laboratory of Microbial Metabolism, Ministry of Education, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China [3] Department of Environmental Engineering, Zhejiang University, Hangzhou 310029, China [4]
分类号 Q94(植物学)
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发布时间 2007-04-25(万方平台首次上网日期,不代表论文的发表时间)
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植物学报(英文版)

植物学报(英文版)

2007年49卷2期

222-229页

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