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Genome-Wide Comparative Analysis and Expression Pattern of TCP Gene Families in Arabidopsis thaliana and Oryza sativa

摘要Several TCP genes have been reported to play important roles in plant development; the TCP homologs encode a plant-specific family of putative transcription factors. To understand the evolutionary relationship of TCP genes of Arabidopsis thaliana and Oryza sativa L. (hereafter called rice), we have identified 23 and 22 TCP genes in the Arabidopsls and rice genomes, respectively. Using phylogenetic analysis, we grouped these TCP genes into three classes. In addition, the motifs outside the TCP domain further support the evolutionary relationships among these genes. The genome distribution of the TCP genes strongly supports the hypothesis that genome-wide and tandem duplication contributed to the expansion of the TCP gene family. The expression pattern of the TCP genes was analyzed further, providing useful clues about the function of these genes.

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作者单位 Shanghai Jiao Jong University-Shanghai Institute for Biological Sciences-Pennsylvania State University Joint Center for Life Sciences, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China;School of Life Sciences, Shanghai University, Shanghai 200444, China [1] Shanghai Jiao Jong University-Shanghai Institute for Biological Sciences-Pennsylvania State University Joint Center for Life Sciences, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China;Department of Biology and the Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802, USA [2] School of Life Sciences, Shanghai University, Shanghai 200444, China [3] Shanghai Jiao Jong University-Shanghai Institute for Biological Sciences-Pennsylvania State University Joint Center for Life Sciences, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China [4]
分类号 Q94
栏目名称 Omics & Epigenetics
发布时间 2007-07-16
基金项目
国家重点基础研究发展计划(973计划) 国家高技术研究发展计划(863计划) 上海市"曙光计划" Shanghai Institutes of Biological Sciences 国家自然科学基金
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植物学报(英文版)

植物学报(英文版)

2007年49卷6期

885-897页

SCIMEDLINEISTICCSCDCABP

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