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Nitrogen starvation induces genome-wide activation of transposable elements in ArabidopsisFA

摘要Nitrogen (N) availability is a major limiting factor for plant growth and agricultural productivity. Al-though the gene regulation network in response to N starvation has been extensively studied, it re-mains unknown whether N starvation has an im-pact on the activity of transposable elements (TEs). Here, we report that TEs can be transcrip-tionally activated in Arabidopsis under N starva-tion conditions. Through genetic screening of idm1-14 suppressors, we cloned GLU1, which encodes a glutamate synthase that catalyzes the synthesis of glutamate in the primary N assim-ilation pathway. We found that glutamate syn-thase 1 (GLU1) and its functional homologs GLU2 and glutamate transport 1 (GLT1) are redundantly required for TE silencing, suggesting that N me-tabolism can regulate TE activity. Transcriptome and methylome analyses revealed that N starva-tion results in genome-wide TE activation without inducing obvious alteration of DNA methylation. Genetic analysis indicated that N starvation-induced TE activation is also independent of other well-established epigenetic mechanisms, in-cluding histone methylation and heterochromatin decondensation. Our results provide new insights into the regulation of TE activity under stressful environments in planta.

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作者 Yue Wang [1] Yi Liu [2] Shaofeng Qu [3] Wenjie Liang [2] Linhua Sun [3] Dong Ci [4] Zhitong Ren [3] Liu-Min Fan [2] Weiqiang Qian [5] 学术成果认领
作者单位 State Key Laboratory of Protein and Plant Gene Research,School of Advanced Agricultural Sciences,Peking University,Beijing 100871,China;School of Life Sciences,Peking University,Beijing 100871,China [1] School of Life Sciences,Peking University,Beijing 100871,China [2] State Key Laboratory of Protein and Plant Gene Research,School of Advanced Agricultural Sciences,Peking University,Beijing 100871,China [3] Peking University Institute of Advanced Agricultural Sciences,Weifang 261000,China [4] State Key Laboratory of Protein and Plant Gene Research,School of Advanced Agricultural Sciences,Peking University,Beijing 100871,China;Peking University Institute of Advanced Agricultural Sciences,Weifang 261000,China [5]
栏目名称 Research Articles
发布时间 2023-01-13
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植物学报(英文版)

植物学报(英文版)

2022年64卷12期

2374-2384页

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